Crateriforma spongiae: ACLV6H_26065
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Entry
ACLV6H_26065 CDS
T11503
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
cspn Crateriforma spongiae
Pathway
cspn01501
beta-Lactam resistance
cspn01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
cspn00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
ACLV6H_26065
01503 Cationic antimicrobial peptide (CAMP) resistance
ACLV6H_26065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cspn03036
]
ACLV6H_26065
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cspn02000
]
ACLV6H_26065
01504 Antimicrobial resistance genes [BR:
cspn01504
]
ACLV6H_26065
Chromosome and associated proteins [BR:
cspn03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
ACLV6H_26065
Transporters [BR:
cspn02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
ACLV6H_26065
Antimicrobial resistance genes [BR:
cspn01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
ACLV6H_26065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
YknX_C
BSH_CusB
BSH_CzcB
BSH_RND
Beta-barrel_RND
CzcB_C
RND-MFP_C
HH_EMRA
CCDC93_CC
ADIP
BAR
BSH_Fcp1
CCDC39
Beta-barrel_AprE
CSD2
BSH_YknX
Motif
Other DBs
NCBI-ProteinID:
XNP81240
LinkDB
All DBs
Position
6957628..6959016
Genome browser
AA seq
462 aa
AA seq
DB search
MDRFALKPNLAIRLLPFCCDLPATCRHRVWLGPIAMLLIAASVGCQPSGDDTTGTEAKRN
DAPVAVQLVSVQQSTTRQTSRQPATVHPFYEAALRPRVQGFVREVRSDIGDVVKAGDALI
VLDVPDLEQDREAQRARIARLEAEVQRANAGAELARAVVQSAEANVAAAQSEMAGAEAEL
AAAESEFARTQDLVSRQSLQQRMLDEALQRRDSRRAALDAIRSSVNAAQAEVTVAQAKLT
AAAADVDAAKADVDVALRQLDRIEVMLNFATIKAPFDGIITQRNVAPGDLVDAGAGAPLL
RISQVDRVRVHVPVPESDAAHVNAGDAIEVAFPFFPDESPMQGTVTRVAGELDPSTRTMV
VEAVLDNADGKLVPGMFGQATIELAVHENVATLPARAIRFDENGDAYVYVVNDQTVSVQN
IQTGNDDGSTIEVLSDLPAGTNVIDAHLQRFTDGQQVAVLAP
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcttcgccttgaaacccaacctggccattcgtttactgccgttttgttgtgac
ttgccagcgacgtgccggcaccgcgtttggctcgggccgatcgccatgctgttgatcgcc
gcatcggtcggatgccaaccgtccggcgatgacaccaccggcacggaagcgaaacgcaac
gacgcaccggtcgccgtgcaactggtctccgttcagcagtcgacgactcgacaaaccagc
cgccaaccggccacggtgcatccgttctacgaagccgccctacgtcctcgggtgcaaggt
tttgttcgcgaagtccggtcggacatcggcgacgtggtcaaagcgggtgacgctttgatt
gttttggacgtgcccgatttggaacaagaccgcgaagcccagcgggccaggatcgcgcgg
ctggaagccgaagtccaacgcgccaatgccggtgccgaattggcgcgggccgtcgtccag
tccgccgaagccaacgtggcggccgcccaaagtgaaatggccggcgccgaagccgaattg
gccgccgccgaatcggaatttgcccgcacccaggatttggtgtcacgccaatcgctgcag
caacgcatgcttgacgaagcactccagcggcgggacagccgacgtgccgcattggatgcg
atccgttcgtcggtcaacgcggcacaagccgaagtcaccgtcgcccaagcaaagctgacg
gccgcggcagccgacgttgatgccgcgaaggccgatgtcgatgtcgcactgcgtcaattg
gatcgaatcgaagtcatgctgaactttgcgacgatcaaagcaccctttgacggcatcatc
acccagcggaacgtcgccccgggtgacctggtcgatgcgggcgcgggtgccccgttgctg
cgaatcagccaggttgaccgcgtacgagttcatgtgccggttcccgaatccgatgccgcc
catgtcaacgcgggcgatgccatcgaagtcgcgtttccgttctttcccgacgagtcaccg
atgcagggtaccgtcactcgcgtcgccggcgaactggacccatcgacccgcacgatggtg
gtcgaagcggtgttggacaacgccgacggcaagctggtgccgggaatgttcggccaagcg
acgatcgaattggcggtgcacgaaaacgttgccacgttacccgcccgtgcgatccgattt
gacgaaaacggcgacgcatacgtttacgtcgtcaacgatcaaaccgtgtcggtccagaac
atccaaaccggcaacgacgacggatcgacgatcgaggtcctttcggatttacccgccggg
acgaacgtgatcgacgcgcatctgcagcgtttcaccgatggccaacaggtcgcggtcttg
gctccctga
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