Clostridium scatologenes: CSCA_4599
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Entry
CSCA_4599 CDS
T03803
Name
(GenBank) two component transcriptional regulator, winged helix family
KO
K18349
two-component system, OmpR family, response regulator VanR
Organism
csq
Clostridium scatologenes
Pathway
csq01502
Vancomycin resistance
csq02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
csq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CSCA_4599
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CSCA_4599
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
csq02022
]
CSCA_4599
01504 Antimicrobial resistance genes [BR:
csq01504
]
CSCA_4599
Two-component system [BR:
csq02022
]
OmpR family
VanS-VanR (VanE type vancomycin resistance)
CSCA_4599
Antimicrobial resistance genes [BR:
csq01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Ser type [MD:
M00652
]
CSCA_4599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
GerE
Motif
Other DBs
NCBI-ProteinID:
AKA71724
UniProt:
A0A0E3K461
LinkDB
All DBs
Position
4977094..4977801
Genome browser
AA seq
235 aa
AA seq
DB search
MIYNKEMEKILIVEDDKDIRDILKIYLKAESFEAWEAENGKEAFEILESRKPDLVILDLM
LPDTNGLNICKNIRIKYKYPIIMLTAKTADQDKIIGLTYGADDYITKPFNPLEVMARVKA
QLRRYKEYGENTKEDSIIYYKGLILDRKSRQANLNGMELKLTPTEFNILEILLLNKGQVL
NGEKLFHLLREDEYYSKSTNTVAVHIRNLREKMEESFEHPEYIKTVWGVGYIIEA
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgatatataacaaggaaatggaaaaaatattgattgtggaagatgataaagatattaga
gatatattaaaaatctatttaaaagctgaatcctttgaagcatgggaagcagaaaatggt
aaagaggcttttgaaattcttgaaagcagaaagccagacttagttattttggatttaatg
ctgccagatacaaatgggcttaatatttgtaaaaatatccgaatcaaatataagtaccct
ataataatgctcactgccaaaacagcagatcaagacaaaataataggtcttacttatggt
gcagatgattatattactaaaccttttaatccactggaagttatggcaagagttaaagct
cagcttagacgatacaaggagtatggagaaaacactaaggaagatagtattatatattat
aaagggttaattttagatagaaaaagtagacaggctaatttgaatggtatggaattaaag
ctaacgcctacagaatttaatattcttgaaatattactattaaataaaggacaagtttta
aatggagaaaaattgtttcatttgcttagagaagatgaatactattcaaaatctaccaac
acagtagcagttcatattagaaatttaagagaaaaaatggaagaatcttttgaacaccct
gaatatataaaaactgtatggggggtaggttatatcattgaagcgtag
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