Clostridium scatologenes: CSCA_4614 Help Entry CSCA_4614         CDS       T03803                                  Name (GenBank) DNA ligase, NAD-dependent   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism csq  Clostridium scatologenes Pathway csq03030   DNA replication csq03410   Base excision repair csq03420   Nucleotide excision repair csq03430   Mismatch repair Brite KEGG Orthology (KO) [BR:csq00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     CSCA_4614    03410 Base excision repair     CSCA_4614    03420 Nucleotide excision repair     CSCA_4614    03430 Mismatch repair     CSCA_4614  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:csq03032]     CSCA_4614    03400 DNA repair and recombination proteins [BR:csq03400]     CSCA_4614 Enzymes [BR:csq01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      CSCA_4614 DNA replication proteins [BR:csq03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      CSCA_4614 DNA repair and recombination proteins [BR:csq03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      CSCA_4614    NER (nucleotide excision repair)     GGR (global genome repair) factors      CSCA_4614    MMR (mismatch excision repair)     DNA ligase      CSCA_4614   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       CSCA_4614 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 PTCB-BRCT 5_3_exonuc DNA_ligase_ZBD HHH BRCT_2 RNA_ligase Nlig-Ia Zn_ribbon_PADR1 DUF7501 RNA_lig_T4_1 RUBY_RBDX Zn_ribbon_3 Motif Other DBs NCBI-ProteinID:  AKA71739 UniProt:  A0A0E3K3L8 LinkDB All DBs Position 4993857..4995866 Genome browser AA seq 669 aa AA seqDB search MSTIDIKKERIEKLVEELNKYAQEYYLLDNPSISDKEYDLKYDELLKLEKETGIVLPYSP TQRVGDNILKEFQKYTHKGKLWSLDKSQTVQGIIDWHVRNKKALDEYNSTHEEKLPQLEY VITKKFDGLTINCTYDDNGILIKAATRGTGEIGEDITAQARTIMSLPLKINNSNVIEVHG EAIMTREAFEGYNKVAAVPLKNLRNGAAGALRNLNIKETARRKLSAFFYDVGYNEGDSFK TYFEMMEFIKNMGFPLDNYIKVCSSIEEIENELKYVEEIRSELNYDIDGVVIAINDMKTR DILGYTIKFPKWAIAYKFEAEEATTKLLDVEWNVGRSGRVTPTAILEPVELAGVTVKRAT LNNMDDIKRKEVRIGCSVFVRRSNDVIPEIMGVVQDTLEGSIEIQAPEKCPYCGSELVQD GVHYFCDNTLSCKPQMVKSIVHFGSREAMNIEGFSEKTAEQLFEKLQIKSIPDLYRIEKE DLMQLDKFAEKKAQNLVNAIEKSKNCSLASFIYALGIPNIGKKTATDLAKNFKSLDNIMQ SNEEDLVSIQDVGEIVAKSIIEFFNEDKIIKSINELFELGVKPSFEEEEVSKSLFSDKTI VVTGSLENYTRTTIKEKLQSVGAKVSGSVSKKTDYVLAGKEAGSKYDKALELGVKIINEE EFEKMLNEL NT seq 2010 nt NT seq  +upstreamnt  +downstreamnt atgagtacaattgatattaaaaaggaacgaattgaaaagttagttgaggagctaaataaa tacgcacaggaatattatcttttagataatccaagtatttcagataaagagtatgattta aaatatgatgaattgttaaaacttgaaaaagaaacaggaatagtattgccctattcacct acacaaagggttggagacaatatattaaaagagtttcagaagtatactcataaaggtaag ctgtggagcttagacaagtcacaaactgttcaagggatcatagattggcatgtaagaaat aagaaggctttagatgagtataattctactcatgaagaaaagttaccacaacttgaatat gttattactaaaaagtttgatgggcttactataaactgtacttatgatgataatggaatt cttataaaagcagctacaaggggaacaggtgaaataggtgaagacataactgcacaagca agaactataatgtcactacctttaaaaataaataatagtaatgttatagaagtccatggt gaggctataatgactcgtgaagcttttgaaggatataataaggttgcagctgtacctctt aaaaatttgagaaatggagcagcaggtgctttaagaaatttaaatataaaggaaacggct agaagaaaactttcagctttcttttatgatgttggttacaatgaaggtgattcttttaaa acgtattttgagatgatggaattcataaagaatatgggatttcctttggataactatatt aaagtttgcagcagtatagaagaaatagagaatgaactaaagtatgtagaggaaataaga tctgaattaaattatgatatagatggagtggtaattgctattaacgatatgaagacaagg gacattcttggatataccataaaatttcctaagtgggcaattgcatataaatttgaagca gaagaagccacaacaaagcttctagatgtagaatggaatgtaggaagaagtggaagagtt acacctacagcaatactagaaccagtagagttagctggggttacggtaaaaagagctaca cttaataacatggatgatataaaaagaaaagaagttagaattggatgcagtgtttttgta agaagatctaatgatgtaattccagagataatgggagtggttcaggatacattagaagga agtatagaaatacaagcaccggaaaagtgtccttattgtggcagtgaattagtacaagat ggtgttcattatttttgcgataacactttgtcttgcaaaccacaaatggtgaaaagcata gttcattttggaagtagagaagcaatgaatatagaaggttttagtgaaaaaactgctgaa cagctttttgaaaaacttcaaataaaatctatacctgatttgtatagaatagaaaaagag gatttaatgcagttggataagtttgctgagaaaaaggctcaaaatcttgtaaatgccata gagaagagtaaaaattgcagtttggcatcttttatatatgcattaggaatacctaatata ggtaagaaaactgctacagatttggctaagaattttaagtccttggataatataatgcaa agtaatgaagaagatcttgtatcaattcaagatgtaggagaaattgttgcgaaaagtata atagaattttttaatgaagacaaaataataaagagtataaatgaactttttgaattagga gtaaaaccaagctttgaagaagaggaagtatcaaaaagtttatttagcgacaaaactata gttgtaactgggagtttggaaaattacactagaactactataaaagaaaaattacaatca gttggtgcaaaagtatcaggaagtgtaagtaagaagactgattatgttttagcagggaaa gaagctggttccaaatatgataaggctttagaacttggtgtaaaaattataaatgaagaa gaatttgagaaaatgttaaatgaattgtaa

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