Clostridium scatologenes: CSCA_5314
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Entry
CSCA_5314 CDS
T03803
Name
(GenBank) two component transcriptional regulator, winged helix family
KO
K18349
two-component system, OmpR family, response regulator VanR
Organism
csq
Clostridium scatologenes
Pathway
csq01502
Vancomycin resistance
csq02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
csq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CSCA_5314
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CSCA_5314
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
csq02022
]
CSCA_5314
01504 Antimicrobial resistance genes [BR:
csq01504
]
CSCA_5314
Two-component system [BR:
csq02022
]
OmpR family
VanS-VanR (VanE type vancomycin resistance)
CSCA_5314
Antimicrobial resistance genes [BR:
csq01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Ser type [MD:
M00652
]
CSCA_5314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
GerE
cREC_REC
Motif
Other DBs
NCBI-ProteinID:
AKA72439
UniProt:
A0A0E3K4J5
LinkDB
All DBs
Position
5728359..5729057
Genome browser
AA seq
232 aa
AA seq
DB search
MSKETILVVDDEKEIRNLIGIYLENEGYKVIKASDGCEALKVLKSQQVHLIILDIMMPNM
DGMEACMKIREHKNMPIIMLSAKGEDIDKIMGLTTGADDYITKPFNPLELLARVKSQLRR
YTKLNNAIQNINSDIIEIDDLTINVSTHEVKVGEKLINLTRREFDILELLAKNRGIVFST
EKIYERVWNEEFYQSDNTVMVHIRKIREKIEENSRKPKYIKTVWGVGYKIEN
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagaaactattcttgtagttgatgatgaaaaagagattagaaatttaatagga
atatatttagaaaatgaagggtacaaagttattaaggcttctgacggttgtgaagcttta
aaggtacttaaaagtcagcaggtacatttaattatactagacattatgatgcctaatatg
gatggtatggaagcttgcatgaaaataagagaacataaaaacatgcctataataatgctt
tcggcaaaaggagaagatattgacaaaataatggggcttacaacaggagcagatgattat
ataactaaaccatttaatccattggagcttttagctagggtaaaatctcaattaaggcga
tatactaaattaaataatgcaatacaaaatataaattcagatataattgagatagatgat
ttaaccataaatgtaagtacacatgaagtaaaagtaggagagaaattaattaatcttacc
agaagggaatttgacatattggagttattagctaaaaatagaggaattgtttttagtact
gaaaaaatatatgaaagagtgtggaatgaagaattttatcaatcagataatactgttatg
gttcatataaggaagataagggaaaagatcgaagaaaattctagaaaacctaagtatata
aaaactgtgtggggagttggctataaaattgagaattag
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