Comamonas squillarum: N4T19_01890
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Entry
N4T19_01890 CDS
T10846
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
csqu Comamonas squillarum
Pathway
csqu01501
beta-Lactam resistance
csqu01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
csqu00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
N4T19_01890
01503 Cationic antimicrobial peptide (CAMP) resistance
N4T19_01890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csqu03036
]
N4T19_01890
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csqu02000
]
N4T19_01890
01504 Antimicrobial resistance genes [BR:
csqu01504
]
N4T19_01890
Chromosome and associated proteins [BR:
csqu03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
N4T19_01890
Transporters [BR:
csqu02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
N4T19_01890
Antimicrobial resistance genes [BR:
csqu01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
N4T19_01890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_RND
BSH_CusB
HH_YBHG
HH_EMRA
BSH_YknX
BSH_CzcB
HH_MFP_RND
Motif
Other DBs
NCBI-ProteinID:
UXC18911
UniProt:
A0ABY5ZYA5
LinkDB
All DBs
Position
416618..417796
Genome browser
AA seq
392 aa
AA seq
DB search
MTSGWRVGLGLGLGSLALLGLVACSEGSADKTAKPVAEVVRTVSVAQVELRPMGGVQQAS
GLLVAREEIAIGPELSGYRVAALLADEGDQVRAGQPLARLDDGLLQAKIAQAQASLVQAK
AQATQARAESARVEGLDGQGVLSDEQIQQRRTAAASAQANADVAAANLAGLRVEAERMVL
RAPVAGVVLQRNVRRGDVASPGGEAMFRLARDGMVELAAEVPEDQVDRIQPGNQVAVTLA
SGVELEGQVRLLSRRVDDKTKLAQVRVALPVRADLRPGGFAQARFAQAAAPVAAVPEKAI
HFEAGGPQLATIDADSRIRKLPVSLGARAQGWVALRDGPPLGTRLALGGGAFVLEGDRVQ
INGAAQPAAVPATPEAAPAPAPAAAAAAGGQR
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcggatggcgcgtgggcttggggctaggcctggggtcgctggccctgctgggc
ctggtggcctgctccgaaggcagtgcggacaagactgcgaagccggtggccgaggtggtg
cgaacggtgagcgtggcgcaggtggagctgcgtcccatgggtggggtgcagcaggcatcg
ggcctgctggtggcgcgcgaagaaattgcgattggcccggagctgagcggctaccgggtg
gccgcgctgctggccgatgagggcgaccaggtacgtgccggccagccgttggcgcggctc
gatgacggcttgctgcaggccaagattgcccaggcccaggccagcctggtgcaggccaag
gcgcaggccacgcaggcccgggccgaatcggcacgggtcgaaggcctggacggccagggc
gtgctgtcggacgagcagatccagcagcgccgcacggcagcggccagcgcccaggccaat
gccgatgtggcagcggccaacctggcggggctgcgcgtagaggccgagcgcatggtgctg
cgcgcgccggtggccggtgtggtgctgcagcgcaatgtgcgccggggcgatgtggccagc
cctgggggcgaggcgatgttccgcctggcgcgggacggcatggtggagctggctgccgag
gtgcccgaggaccaggtggaccgtatccagccgggcaaccaggtggcggtgaccctggct
tcgggtgttgagctggagggccaggtgcggcttttgtcgcgccgggtggacgacaagacc
aagctggcccaggtgcgcgtggcgctgccggtgcgggccgatctgcgccccggcggcttt
gcgcaggcgcgttttgcgcaggcggccgcaccggtggcggcagtgccagaaaaagccatc
cactttgaagccggtggcccgcagctggccacgatcgatgccgacagccgtatccgcaag
ctgccggtgagcctgggcgcccgtgcccagggctgggtggccttgcgcgatggcccgccg
ctgggcacgcgcctggccttgggcggcggcgcctttgtgctggagggggaccgggtgcag
atcaatggcgctgcccagccggccgccgtgcctgccacgccggaggcggcacctgcacct
gcacctgctgctgcggctgcggctggaggccagcgatga
DBGET
integrated database retrieval system
