Comamonas squillarum: N4T19_04205
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Entry
N4T19_04205 CDS
T10846
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
csqu Comamonas squillarum
Pathway
csqu01501
beta-Lactam resistance
csqu01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
csqu00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
N4T19_04205
01503 Cationic antimicrobial peptide (CAMP) resistance
N4T19_04205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csqu03036
]
N4T19_04205
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csqu02000
]
N4T19_04205
01504 Antimicrobial resistance genes [BR:
csqu01504
]
N4T19_04205
Chromosome and associated proteins [BR:
csqu03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
N4T19_04205
Transporters [BR:
csqu02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
N4T19_04205
Antimicrobial resistance genes [BR:
csqu01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
N4T19_04205
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
YknX_C
BSH_CusB
Beta-barrel_RND_2
HH_AAEA_pHBA
HH_EMRA
BSH_YknX
CzcB_C
Motif
Other DBs
NCBI-ProteinID:
UXC19336
UniProt:
A0ABY6A4U9
LinkDB
All DBs
Position
888566..889807
Genome browser
AA seq
413 aa
AA seq
DB search
MATVGKLSSPCTFGQLARVGAVVAALGLLTACTDKPAPTAAAPQAPEVGIITVQSASQQL
TAELPGRTNAFMIAEIRPQANGIVEKRLFTEGASVKAGQALYQLDDRPARAAVNSAEAAL
AKAKATAQTARSNAARNSELVKIDAISRQVFDDSQALVAQTASDVAVAEAALDNARINLQ
YTRISSPISGKVSTSAVTPGALVTANQATALTTVVQLDPMYVDFTQSSTEMLQLQRDLKA
GRFQRLEGDQIPVRIRLDDGTEYSHEAKLKFSGVIVSATTGTVTLRAQVPNPDGVLMPNM
YVQALLPTAVAPDALLVPQQSVVRDLTGKPTVLVVTAEDKVQKRTLQLDRAVGSQWLVGS
GLKSGERVVVDGFQRVKDGDKVRVAEVDLKAQTERVRSPGRVPGQAAAPAAAQ
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
ttggcaactgtcggaaagctttcctccccctgtacgtttggccagctcgcccgggttggc
gcggtggtcgcagccctgggcctgctgactgcctgcacggacaaacctgcgcccaccgct
gcagcgccgcaggccccggaggtgggcatcatcaccgtgcaatccgcatcgcagcagctg
actgccgagctgccgggccgcaccaatgccttcatgattgccgagattcgcccccaggcc
aacggcattgtcgaaaagcgcctgttcaccgaaggtgcctcggtcaaggccggtcaggcg
ctctaccagctcgatgaccggcccgcgcgggccgcggtcaacagcgccgaggcggcactg
gccaaagccaaggccacggcgcagacggcgcgtagcaacgcagcgcgcaacagcgagctg
gtcaagatcgatgccatcagccgccaggtgtttgatgacagccaggcgctggtcgcgcag
accgcctccgatgtggccgtcgccgaggccgcgctggacaatgcgcgcatcaatctgcag
tacacccgcatcagctcgcccatcagcggtaaggtcagcacctcggccgtcacgcccggt
gcgctggtcacggccaaccaggcgacggcactcaccaccgtggtgcagctcgatccgatg
tatgtggacttcacccaatcgagcaccgagatgctgcagctgcagcgcgacctgaaggcg
gggcgctttcaacgcctcgaaggcgaccagattccggtgcgcatccgcctcgatgacggc
accgaatacagccatgaggccaagctcaagttctccggcgtgattgtcagcgccaccacg
ggcacggtcaccttgcgggcgcaggtgcccaaccccgatggcgtgctgatgcccaatatg
tatgtgcaggccttgctgcccacggccgtggcgcccgatgcgctgctcgtgccccagcaa
tcggtggtgcgcgatttgaccggcaagccgaccgtcttggtggtcaccgccgaggacaag
gtgcaaaagcgcaccttgcaactggaccgcgctgtgggcagccagtggctggtgggcagt
gggctcaagtccggtgagcgcgtggtggtcgatggcttccagcgcgtcaaggacggtgac
aaggtgcgggtggccgaggtggacctcaaggcacagaccgagcgcgtgcgcagcccggga
cgcgttcccggccaggccgcagcgccggcagcagcccagtaa
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