Comamonas squillarum: N4T19_09380
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Entry
N4T19_09380 CDS
T10846
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
csqu Comamonas squillarum
Pathway
csqu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csqu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
N4T19_09380 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csqu03400
]
N4T19_09380 (nth)
Enzymes [BR:
csqu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
N4T19_09380 (nth)
DNA repair and recombination proteins [BR:
csqu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
N4T19_09380 (nth)
Prokaryotic type
N4T19_09380 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Ogg-HhH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
UXC20297
LinkDB
All DBs
Position
2007582..2008235
Genome browser
AA seq
217 aa
AA seq
DB search
MKTADIQPFFATLKAANPSPQTELEYTSVFELLAAVLLSAQATDVGVNKATRKLFPVANT
PQAMLALGLEGLEGYIKTIGLYRSKAKHLMETCRILVERHGGQVPDTREALEALPGVGRK
TANVVLNVAFGQPTMAVDTHIFRVSNRTGLAPGKNPLEVEKQLMQRVPDDYAVDSHHWLI
LLGRYVCQARKPRCWECLVSSYCDFSPKTPPPQGALR
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccgctgatatccaacccttcttcgccaccttgaaggcggccaatccttcgccc
cagaccgagctggaatacacctcggtgttcgagctgctcgctgccgtgctgctgtcggcc
caggcaaccgatgtgggcgtgaacaaggccacccgcaagctctttccggtcgccaacacg
ccccaggccatgctggcgctggggctggaaggcctggagggctatatcaagaccatcggc
ctgtaccgcagcaaggccaagcatctgatggaaacctgccgcattctggtggaacgccat
ggcggccaggtgcccgatacgcgcgaggcgctcgaagcgcttcccggcgtgggccgcaag
accgccaatgtggtgctcaatgtggcctttggccagccgacgatggcggtggacacccat
atcttccgcgtcagcaaccgcaccggcctggcgcccggcaagaacccgctggaggtggaa
aagcagctgatgcagcgcgtgccggacgactatgccgtcgattcgcaccactggctgatc
ctgctgggccgctatgtctgccaggcgcgcaagccgcgctgctgggaatgcctggtcagc
agctactgcgatttctcgcccaagacaccgccaccgcaaggcgcgctgcgctga
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