Comamonas squillarum: N4T19_12345
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Entry
N4T19_12345 CDS
T10846
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
csqu Comamonas squillarum
Pathway
csqu00540
Lipopolysaccharide biosynthesis
csqu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csqu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
N4T19_12345 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
csqu01005
]
N4T19_12345 (lpxC)
Enzymes [BR:
csqu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
N4T19_12345 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
csqu01005
]
Lipid A
N4T19_12345 (lpxC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
UXC16550
LinkDB
All DBs
Position
complement(2661819..2662742)
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AA seq
307 aa
AA seq
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MLQQRTIKSLTRAVGVGLHSGQRVELTLRPAQPNTGIVFRRVDLPEPVDIPVNAEAVVDT
RMASTLGKGDVRIHTVEHVMSACAGLGIDNLYIDVTAEEIPILDGSSASFVFLLQSAGIE
LQNAPKRFLRLTKPVEIRQGEGAAQKWARLDPYHGYKLRFEIDFSHPAVDSTGQTYEFDL
GIGNYSRDIARARTFGFTKDVEMLRSNGLALGGGLDNAIVMDDYKVLNSDGLRYDDEFVK
HKILDAIGDLYIVGYPLLAAYSAFRSGHGLNNLLLRELMQRQDAWDIVTFDHVREAPQGF
AQSALAW
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgctccagcaacgaaccatcaagtctttaacccgtgccgtgggcgtgggcctgcacagc
ggccagcgggtcgagctcaccttgcgtcctgcacaacccaatacgggcattgtgtttcgc
cgggtggacctgcccgagccggtcgatatccccgtcaacgccgaagcggtggtggacacc
cgcatggcctcgaccctgggcaagggcgatgtgcgcatccatacggtggagcatgtgatg
tcggcctgcgcgggcctgggcatcgacaacctctatatcgacgtgacagccgaggaaatc
ccgattctcgacggctcatccgcgtcctttgtgtttttgctgcaaagcgccggtatcgag
ctgcaaaacgcacccaagcgctttttgcgtctgaccaagccggtcgaaatccgccagggc
gaaggcgctgcgcaaaagtgggcgcgtctggacccctaccacggctacaagctgcgtttc
gagatcgacttctcgcacccggctgtcgattccaccggccagacctatgagttcgacctg
ggcatcggcaactacagccgcgatatcgcccgcgcccgcacctttggctttaccaaggat
gtcgagatgctgcgctccaacggcctggcgctgggcggcggtctggacaatgccatcgtc
atggacgactacaaggtgctcaacagcgacggcttgcgctatgacgacgagttcgtcaaa
cacaagatcctcgatgccatcggtgacctctacatcgtgggctatcccttgctggccgcc
tacagcgcgttccgctcgggccatggcctcaacaacctgctgctgcgcgagctgatgcag
cgccaggacgcctgggacatcgtcacctttgaccatgtgcgtgaagccccgcagggcttt
gcacagtcggccctcgcctggtaa
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