Clostridium saccharoperbutylacetonicum: Cspa_c51280
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Entry
Cspa_c51280 CDS
T02467
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
csr
Clostridium saccharoperbutylacetonicum
Pathway
csr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Cspa_c51280 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csr03400
]
Cspa_c51280 (nth)
Enzymes [BR:
csr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Cspa_c51280 (nth)
DNA repair and recombination proteins [BR:
csr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Cspa_c51280 (nth)
Prokaryotic type
Cspa_c51280 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
EndIII_4Fe-2S
HHH
DUF3349
Laminin_II
Motif
Other DBs
NCBI-ProteinID:
AGF58879
UniProt:
M1MLS4
LinkDB
All DBs
Position
complement(5671857..5672489)
Genome browser
AA seq
210 aa
AA seq
DB search
MVMKARTKKIVDILKKAYPDAKCELNYETPLQLLVATILSAQTTDKKVNEVTKDLFKDYP
DLDAFLTITNDELEERIKQIGLYRNKSKNLILMFNQLKEKFNGEVPKTMEEITSLAGAGR
KTANVVLSNAFNVPSIAVDTHVFRVSNRLDLANSNNVLEVEKQLQKELPKKEWTLMHHLL
IFHGRRCCVARNPKCSECPLNTLCKYRYPN
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atggttatgaaggcaaggacgaaaaaaattgtagatattttaaaaaaagcatatcctgat
gcaaaatgtgaattgaactatgaaacaccactccaattacttgtagctacaatattgtct
gctcaaactactgataaaaaagtaaatgaagttacaaaggatttatttaaggattatcca
gatttagatgcttttttaactattacaaatgatgaacttgaagaacgtataaaacaaata
ggattatatagaaataagtccaagaatttaatattaatgtttaatcaattaaaagaaaaa
tttaatggagaagttccaaaaactatggaagaaatcacatctcttgcaggtgcaggaaga
aagacagcaaatgttgtactttcaaatgcatttaatgtgccctctatagcagtagatact
catgtatttcgagtatctaatagattagatttggctaattcaaataatgttttagaggtg
gaaaaacaactacaaaaagagctacctaaaaaagaatggactttaatgcatcatctttta
atttttcatggaagaagatgttgcgttgctagaaacccgaaatgtagtgaatgtccgtta
aatacattatgtaagtatagatatccaaattaa
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