Thermoclostridium stercorarium subsp. stercorarium DSM 8532: Cst_c10800
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Entry
Cst_c10800 CDS
T02440
Symbol
yodJ
Name
(GenBank) putative carboxypeptidase YodJ
KO
K07260
zinc D-Ala-D-Ala carboxypeptidase [EC:
3.4.17.14
]
Organism
css
Thermoclostridium stercorarium subsp. stercorarium DSM 8532
Pathway
css00550
Peptidoglycan biosynthesis
css01100
Metabolic pathways
css01502
Vancomycin resistance
css02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
css00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Cst_c10800 (yodJ)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Cst_c10800 (yodJ)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Cst_c10800 (yodJ)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
css01002
]
Cst_c10800 (yodJ)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
css01011
]
Cst_c10800 (yodJ)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
css01504
]
Cst_c10800 (yodJ)
Enzymes [BR:
css01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.14 zinc D-Ala-D-Ala carboxypeptidase
Cst_c10800 (yodJ)
Peptidases and inhibitors [BR:
css01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
Cst_c10800 (yodJ)
Peptidoglycan biosynthesis and degradation proteins [BR:
css01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
Cst_c10800 (yodJ)
Antimicrobial resistance genes [BR:
css01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
Cst_c10800 (yodJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VanY
VldE
DUF1244
Motif
Other DBs
NCBI-ProteinID:
AGC68078
UniProt:
L7VR69
LinkDB
All DBs
Position
1173134..1174144
Genome browser
AA seq
336 aa
AA seq
DB search
MEAGNTGKRLYKIVQIALIFLLTAAVCGIVKENRGSGDAKNEGNSRNYGQNAAVPDKREK
TNPPAVPSGEQLTACSELSLYSGLPYFIEEYSERYIDYKRKNPDLPYEKVITYVNIGLDY
DFYENVHVVEDGHEITVLVNKYNKLDDDFTPELTQLDQSVCVPGRGPQYLRREACEAFVK
MHSDAKKLGLNITAYGTYRSIKKQHEIWNNAVKSGRTVEEVDSLNARGGHSEHHTGLAVD
VIINDYAVEQTEEFKWYSENAHKYGFIIRYPKGKEHITGYKYEPWHLRYVGPEIAKEVYE
KGITYDEYYVQAIQPAKNKNIVNCNIKCNTYSGNHP
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgggaaatactgggaaaaggctctataaaatcgtacaaatagcgctgattttt
cttttaacggcggctgtgtgcggaattgttaaggagaatagaggcagcggcgatgcaaaa
aacgaagggaattcacggaattatggccaaaatgctgccgttccggataaacgggaaaaa
acaaaccctccggcggttccgtctggcgaacagttaacggcatgcagtgagctgtcttta
tattcgggcttgccttattttattgaggaatattccgagaggtatattgattataagcgg
aaaaatcccgatttgccttatgaaaaagtcattacctacgtaaacatcggattggattat
gacttttacgaaaatgttcatgttgttgaagacgggcatgaaataaccgtactggtgaac
aagtataacaagctcgatgatgattttacccccgaacttactcagcttgatcagtcggtt
tgtgttcctggcagaggcccgcaataccttcgcagggaggcctgtgaggcctttgttaag
atgcacagtgatgcgaaaaagctgggattgaatattaccgcatatggcacgtacagaagc
attaagaagcagcacgaaatttggaataacgccgtgaaaagcgggcgcaccgttgaagaa
gttgacagtctgaatgcgaggggcgggcacagtgagcatcacaccggtctggcggtggac
gtgataataaacgattacgccgtggaacagaccgaagaattcaaatggtacagcgagaat
gcccataaatacggcttcattataaggtatccgaaggggaaggagcatataaccggatac
aaatatgaaccgtggcatttaaggtatgtagggcctgaaattgcgaaagaagtttatgaa
aaaggcatcacttatgatgagtattatgtgcaggcaattcaaccggcaaaaaataaaaac
attgtaaattgcaatattaaatgcaacacctatagtggaaatcatccataa
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