Acetoanaerobium sticklandii: CLOST_1099
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Entry
CLOST_1099 CDS
T01334
Symbol
nth
Name
(GenBank) DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
cst
Acetoanaerobium sticklandii
Pathway
cst03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CLOST_1099 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cst03400
]
CLOST_1099 (nth)
Enzymes [BR:
cst01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CLOST_1099 (nth)
DNA repair and recombination proteins [BR:
cst03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CLOST_1099 (nth)
Prokaryotic type
CLOST_1099 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Ogg-HhH
HHH_5
RecR_HhH
DUF4007
HHH_8
Motif
Other DBs
NCBI-ProteinID:
CBH21221
UniProt:
E3PXQ6
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All DBs
Position
1255263..1255892
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AA seq
209 aa
AA seq
DB search
MSKYNIIVKTLLDTYPDAKCELEYKTPYELLVATVLSAQSTDVRVNIVTKELFKNYNTPE
KILKLGEEKLMEYIKSIGFYNVKSKNIIALSHLLIQNYDSQVPDEMDELLKLPGVGRKTA
NVVLSNCFGVPAIAVDTHVFRVSTRLGFSDKKDPLQVEQDLMKKISKKYWTDAHHAFIFH
GRRICKARNPICELCSVQSYCKFYKKKKG
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagtataatattattgtaaagacattacttgatacttatcctgatgcaaaatgt
gagcttgaatataaaacaccttacgagctattggtggctactgttttaagtgctcaatcg
acggatgtaagagtcaatattgttacaaaagagctttttaaaaactataatactcctgaa
aaaattcttaagctaggagaagaaaaattgatggagtacataaaaagtataggcttttat
aatgtcaaatcaaaaaatataatagcattatcacatttgctgatacaaaattatgacagt
caagtgccagatgaaatggatgaacttttaaaactacctggtgtgggaaggaaaactgca
aatgtagtacttagcaattgctttggagttcctgctatagctgtggatactcatgttttt
agagtgtctacaagactgggcttctctgataaaaaggaccctcttcaagttgaacaagat
ttaatgaagaaaatatcgaaaaaatactggaccgatgctcatcatgcatttatttttcat
ggaagaaggatttgtaaggcaaggaatccaatttgtgagctatgttcagtacaaagctat
tgtaaattttataaaaagaaaaaggggtag
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