KEGG   Cydia strobilella (spruce-seed moth): 134741476
Entry
134741476         CDS       T10503                                 
Name
(RefSeq) TNF receptor-associated factor 6
  KO
K03175  TNF receptor-associated factor 6 [EC:2.3.2.27]
Organism
cstb  Cydia strobilella (spruce-seed moth)
Pathway
cstb04013  MAPK signaling pathway - fly
cstb04120  Ubiquitin mediated proteolysis
cstb04140  Autophagy - animal
cstb04144  Endocytosis
cstb04214  Apoptosis - fly
cstb04620  Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:cstb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    134741476
 09130 Environmental Information Processing
  09132 Signal transduction
   04013 MAPK signaling pathway - fly
    134741476
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    134741476
   04140 Autophagy - animal
    134741476
  09143 Cell growth and death
   04214 Apoptosis - fly
    134741476
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    134741476
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cstb04131]
    134741476
   04121 Ubiquitin system [BR:cstb04121]
    134741476
Enzymes [BR:cstb01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     134741476
Membrane trafficking [BR:cstb04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Ubiquitin E3 ligases
    134741476
Ubiquitin system [BR:cstb04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    134741476
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 zf-C3HC4_2 zf-C3HC4 zf-C3HC4_4 zf-RING_2 zf-RING_UBOX zf-C3HC4_3 zf-rbx1 U-box zf-TRAF zf-RING_5 zf-Nse TRAF3_RING RING_XB3-XBAT31 Sina_ZnF zf-RING_10 zf-ANAPC11 zf-RING_6 Prok-RING_4 Sina_RING zf-P11
Other DBs
NCBI-GeneID: 134741476
NCBI-ProteinID: XP_063530331
LinkDB
Position
5:complement(17957928..17963398)
AA seq 410 aa
MDTPRTKNASEGIAPMGILSLNEMVAEPESRYECPVCLNWLRDPVITTCGHKFCKSCITS
WLQNSGHCPIDNINLSMKVDIFPDNYTKREIQEQRMSCPFASMGCSVKVTPLDLDAHIAS
CEHNQPQTSSQCVPCSFRVLGCKEQFSSQEEAQEHVKRDTMTHLSYLVNAYSEMKITNDM
SNANIDPKEQEAMVLWAPDKDGESKPPSLTNASALIRALYERVVVLEQRNREQDIVIGNI
SKQLSALTVAKRKQNNEMLLRYCMGNYIWRIDNFKTRLDAMLKDHSKMLYSPGFYTTPNG
YRFCVRLNISPQNPLCFALHVHLMKTDYDECLEWPFNGRISFSMVNQYEPELTQRDTMMS
NSNLIAFRRPAAEICLRGFGYTEYAVVSDVVRNGFVKDDSLVFRVHIKCV
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggatacgccaagaacaaaaaatgcttcagaaggaattgcgccaatgggcatattatcc
ttgaatgagatggtagcagaacctgagtcgaggtacgagtgtcccgtatgcctaaactgg
cttcgcgacccggtgatcaccacttgtggtcacaaattctgcaaaagctgcataacttca
tggttacaaaatagtggacactgtcctatagacaacatcaacctgagcatgaaagtggac
atatttcctgacaactatactaagcgggaaatacaagaacagaggatgtcctgtcccttt
gcttctatgggttgctcagtaaaagtgaccccattagacttggacgcgcacatagcctcc
tgtgaacacaatcagcctcagacctccagccaatgcgtgccatgctctttccgggtattg
gggtgtaaggagcagttcagcagccaggaggaggcccaagagcacgttaagagagacacc
atgacgcatttgagctatctcgtgaacgcttattcagagatgaagataaccaacgacatg
tcgaatgcgaacatcgacccgaaagagcaggaagccatggttctgtgggcgccagacaag
gacggcgagagcaagcccccgtcgctcactaacgcaagcgcgctcatacgagcattatac
gaacgagtagtagtattggagcaaagaaaccgcgagcaagacatcgtaataggcaatatc
tcgaagcagctttccgctttgaccgtcgccaaacgaaaacagaacaacgaaatgctccta
cgatactgcatgggcaactatatatggaggatcgacaatttcaaaactaggttggacgct
atgctaaaggatcattcgaaaatgctgtacagtccagggttttacaccacgcctaatggt
tacaggttctgcgtccggctcaacatatcccctcagaacccgctctgcttcgccctgcac
gtgcacctaatgaaaactgattacgacgagtgcctcgaatggcccttcaacgggcgcatc
tccttctccatggtgaaccagtacgagccggagctgacgcagcgggacacgatgatgtcc
aactccaacctgatcgcgttccggcggcccgcggccgagatctgcctgcgcgggttcggc
tacacggagtacgccgtcgtgagcgacgtggtcaggaacggcttcgtcaaggacgactct
ctcgtcttcagagtgcatatcaagtgtgtatga

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