Cydia strobilella (spruce-seed moth): 134742353
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Entry
134742353 CDS
T10503
Name
(RefSeq) telomerase-binding protein EST1A
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
cstb Cydia strobilella (spruce-seed moth)
Pathway
cstb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
134742353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cstb03019
]
134742353
03032 DNA replication proteins [BR:
cstb03032
]
134742353
Messenger RNA biogenesis [BR:
cstb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
134742353
mRNA cycle factors
Common to processing body (P body) and stress granule
134742353
DNA replication proteins [BR:
cstb03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
134742353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
Motif
Other DBs
NCBI-GeneID:
134742353
NCBI-ProteinID:
XP_063531483
LinkDB
All DBs
Position
6:10037810..10108675
Genome browser
AA seq
1570 aa
AA seq
DB search
MDDECKEYRRSKPQQKLYKPGSGPLRRSGNGFDGKMDSYEVENGARARSHYGSHNSVNDL
DINASGREHINRHKKPEQQLYVPKSSESGYDMDRQTQAPMRGDNNSSQYMNRRMSNKHDN
KHGFNSASGSRGGSRRDRSYAEYQNKDSTNNDINYNRHYRQVSEPRAQSPTHPAHKVKNV
DRNRDSRSMEASAGRQLSGSGAKPPTGRRNSAGYATDSSRPKYMVNLDNIPPRFRKKFLE
QSGHHSFDSMDQKNKQFSNYSGQSNYNQGPYTNTTSSWSQTLPSRGRGRLRDNDNFDREK
FINSYLKNYEVLNSRRSTPSNSYLNLSEPSASDDLNLNKRETLNQKSSYDYASKNGIIKA
NHGNTAYHEENQKHDSDTQDDTEAISHSSSNLLDMTNLDWTEEVEKNIKLDDMCDTSTSF
SQSIQPTTVPQEVKPSEPKESKRRSRRRDKRSSSRGQRNSEKKAERNRKDSNVSIQHEAI
TTSVKNRDRERRDSYKSNRSSTIGNSRDDLDHWRSLRSYSREQSTEGRIVSQCNSRDVSA
HRALSPRDHDGFRVPAAVSKNSLWSNNQKKVSNGGWGHTRTPSIERRPSPGPAPAPTEGG
GGGGGGGGGGGRRRAGKRSGRRRRNAENIAPPAPEPPAATPKPTTTNWREEILESKKHTA
PENTHQRNRLNSVMSDKSISETSTSQPGLLILPQSSHLPKDQSRGGSVENQKTLYDYHNP
SKPIIVQTSPTQNNSRMERGMSECGGRTESGDSRGARHRQLLQQVDRADAVLHAHSLLGP
VALDHWHEVADTRIFLQDALKKLLMSDLKYCQAENVEHNFWKILYYNFIEKLRRNLTQVS
PDDKLKAVKLINIIIEEGNDYFENLVQLLEKTYKFNTDDFINDNHVVPPKGLGFIGLALI
SVQKLYIFLGDLTRYKEQINETNNFAKSKFWYTKAQQINPKNGRPYNQLAILAVYARRKL
DAVYYYMRSLMSSNPFASARESLLSLFDENRKKYEAAERKRRAAAEGGQPTENGDTAHGP
RRELWVRVGGRRTTTVQRDSSEERLANMTPVELNKNFITSYLHVHGKLITKIGMETFYES
AGQMLRQFRALLHRQPLPTPAARLLQLTALNMFAVEATVNAKGSNASGRSAWLDCALGVS
LLMFGAMLERCCALLPEPVQSQHHADALLLLPAIKVWSDWMLCHSSVWNPPPSFDNFEIG
TESSPWDWLAKLMNILEDLDDKTIELESESNEGYVSVRLAEDSSLAGFTPLMYMEPAAAW
ARADPPAKHHAAEHALRTRKLLFFGTEYLVGVDPPVLRLEYPTSGAPRYVSAVQHVQTHH
TPLQHLSEDSEDEDSTSAAASGPPSLAEEAAGAEGPDEATRRLLRRKEQLENRKANFERR
RQRMQEMLRVSSAVVEVEVRPRWLVPDTNCFIDHLPLLRAVAAEPGTPYQLAVPLIVMTE
LEGLRKCSRVGPAADAALAWLGGAGAGAGAGVRFATSKGSLLATRAYSERDQRATNDDRV
LATALNLHANIASEPERTEESGGRLVREVVLLTDDRNLRVKALAAELPARDLPSFVAWAD
LTPTNSPSET
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgagtgtaaggagtacagaagaagtaaaccacaacaaaagctgtataaacct
ggcagtggaccgttgcgacgatctggtaatggttttgatggaaaaatggattcatacgaa
gtagaaaacggggccagagctcgaagtcactacggatctcataattctgttaacgattta
gacataaacgctagtggcagggagcacataaaccgccataagaagcctgaacaacaactg
tacgtgcctaagtccagcgagtcagggtatgatatggaccgacagacccaggcgccaatg
cggggtgacaataattctagtcagtatatgaatagaagaatgtcgaataagcatgacaat
aagcatggcttcaatagtgcatcagggtctaggggaggctccaggagagatagatcatat
gcagagtatcaaaacaaagacagtacaaataatgatatcaattataatagacattataga
caagtctctgaacccagggcccagtcaccaacacatccagcccataaggtgaaaaatgtt
gacagaaacagggatagtagaagtatggaggcatctgcagggcggcaactatcaggatcc
ggggctaaaccacctacaggcaggcgcaactcagcaggatatgctactgattcatctcgt
cctaagtacatggtaaacctagacaacataccaccaagatttaggaaaaagtttttagaa
cagtctggtcatcatagttttgacagtatggatcaaaaaaataagcaattttcaaattat
tccggacaatctaactataatcagggcccatatactaacaccacctccagctggtcccaa
accctgccttcaagaggcagggggcgcctcagagacaatgacaactttgacagagaaaaa
ttcatcaattcttacttaaagaactatgaagtactaaattcaagaagatcaaccccaagc
aactcatatctgaacttgagtgagccgagtgcaagtgatgatctaaacctcaataagagg
gaaacactgaaccagaaaagctcttatgattatgcatcaaaaaatggaattataaaagca
aaccatggaaatactgcctaccatgaggagaaccagaaacatgattctgacacgcaagat
gatactgaagctatttcacacagctcatcaaatctgcttgacatgacaaacttggattgg
acggaggaagtggagaagaatattaaactggacgacatgtgtgacacctccactagtttc
tctcagagcatacaaccaaccacagtgccacaggaagtcaaacctagtgagccaaaggag
tccaagcgaagatcccgaagaagagacaagagaagttcaagtagagggcaaagaaattcg
gagaaaaaggcagaacgaaatagaaaggacagtaacgtgagcattcagcacgaagccata
acgaccagtgtaaagaatcgcgacagagaaagaagagacagttacaaaagtaatcgctct
tcgacaattggtaatagcagggatgatttggatcattggagatctctaaggtcgtacagc
agggaacagagtactgaagggaggatagtatcgcaatgcaacagccgggacgtgtcggcg
caccgcgccctcagcccgagggaccacgacggtttcagagtccctgccgccgtttctaag
aactctctatggtcgaataatcagaaaaaagtgtcaaacggtgggtggggccacacgcgc
acacccagcatcgagcggcggccgtcgcccggacccgcgcctgcgccgacggagggcggc
ggcggcggcggcgggggcgggggcgggggcgggcggcgccgcgccggcaagcgctcgggc
cggcgccgccgcaacgccgagaacatcgcgccgcccgcgcccgagccgcccgccgccacg
cccaagcccaccaccaccaactggcgggaggagatactcgagtccaagaagcacacagca
cctgaaaacacccatcaaaggaacaggctaaacagcgtcatgtctgacaaatccatatcg
gaaacgtcgacctcgcagccggggctgttaatattgccgcaaagctctcatttacctaaa
gaccaaagtcgcggtggctcggttgaaaatcagaaaaccctgtatgattatcataatcca
tccaaaccaattattgtacaaacaagtccaacacaaaataattcaagaatggaaagaggg
atgtcggagtgcggaggcaggaccgagtcgggcgattcccgcggggcgcgacaccggcag
ctgctgcagcaggtggaccgcgccgacgccgtgctgcacgcgcactcgctgctcggcccc
gtggcgctcgaccactggcacgaggtcgccgacactaggatatttttacaagacgccctc
aagaaacttctaatgtctgacctcaaatactgtcaagctgaaaacgtagagcacaacttt
tggaaaattttgtattacaatttcatagaaaaattaagaagaaacttaacacaggtttcg
cctgacgacaagcttaaagcagtaaagctaataaacataattatcgaagaaggaaacgat
tatttcgagaatctcgttcaattgttggaaaaaacctacaaatttaatactgacgatttc
atcaacgacaaccacgtcgtgccaccgaaaggcctcggcttcatcgggctagctttaatc
tctgtacaaaaactgtatattttcttgggcgatttgacgagatacaaggagcaaatcaat
gagactaataattttgctaaaagtaaattttggtatacgaaagctcaacagatcaatcca
aagaatgggcgaccatataatcagttagctatattagcggtttatgctaggagaaaatta
gatgcagtttactattatatgagaagtttaatgtcgtcgaacccgtttgcatctgcaaga
gaaagtttgttgtcattatttgatgaaaataggaaaaaatacgaagccgcagaaaggaag
cggcgggccgcagcggaaggtgggcagccgacggagaacggcgacaccgcgcacgggccg
cggcgggagctgtgggtgcgggtcggcggccgtcgcaccaccaccgtgcagcgcgactcg
tcggaggagcgactcgcgaacatgacgcctgttgagttaaacaaaaacttcattacgagc
tacttacacgtacacggaaaactcatcactaaaattgggatggaaacgttttacgagagc
gcgggccagatgctgcgccagttccgcgcgctgctgcaccggcagccgctgcccacgccg
gccgcgcgcctcctccagctcacggcgctcaacatgttcgccgtcgaggccacagtcaac
gctaaagggagcaatgcgtcggggcgctccgcatggctagattgtgcgctgggcgtatcc
ctgctgatgtttggcgcgatgctggagcgctgctgcgcgttgctgccggagccggtgcaa
tcgcagcaccacgctgacgcgctgcttcttctgccagctatcaaggtgtggtcggattgg
atgctatgccacagtagcgtttggaatccaccgccgtccttcgacaatttcgaaatagga
actgaaagcagtccatgggactggcttgcgaaactcatgaacatcctggaagacctcgat
gataagacgatagagttggaaagcgaatcgaacgaaggttacgtgtcggtgcgattagcc
gaggactcgtcgctggccggcttcacgccgctcatgtacatggagccggcggcggcgtgg
gcgcgcgccgacccgcccgccaagcaccacgccgccgagcatgcgctgcgcacgaggaaa
ctgctgttctttggcacagaatacctggtgggtgtagacccgccggtgctgcggctcgag
tacccgacgagcggcgccccgcgctacgtcagcgccgtgcagcacgtgcagacgcaccac
accccactgcaacacttgtccgaagactctgaagatgaagatagcacgagcgcggcggcg
agcgggccgcccagcctcgccgaggaggccgcgggggccgaggggcccgacgaggccacc
aggaggctgctgcgcaggaaggaacagctcgagaacaggaaagccaactttgagaggcgc
cggcagcgcatgcaggagatgctgcgcgtgagttcggcagtcgtggaagtggaggtgcgg
ccgcgctggctggtgcccgacaccaactgcttcatcgaccacctgccgctgctgcgcgcc
gtggccgccgagccgggcacgccctaccagcttgccgtaccacttattgtaatgacggag
ttggagggtctccgcaagtgttcgcgcgtgggccccgccgccgacgcggcgctggcgtgg
ctgggcggcgcgggcgcgggcgcgggcgctggcgtgcgcttcgccaccagcaagggctcg
ctgctcgccacgcgcgcctactccgagcgcgaccagcgcgccaccaacgacgaccgagtg
ctcgccaccgcgctcaacctgcacgccaacatagctagcgaaccagagcggacagaagag
agtggaggccggcttgtgcgggaagtggtgctgctgacggacgaccgcaacctgcgcgtg
aaggcgctggccgccgagctgccggcgcgcgacctgccctccttcgtcgcgtgggccgac
ctcacacccacgaattcgccgtcagaaacataa
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