Conchiformibius steedae: H3L98_04235
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Entry
H3L98_04235 CDS
T06730
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
cste
Conchiformibius steedae
Pathway
cste01501
beta-Lactam resistance
cste01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
cste00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
H3L98_04235
01503 Cationic antimicrobial peptide (CAMP) resistance
H3L98_04235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cste03036
]
H3L98_04235
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cste02000
]
H3L98_04235
01504 Antimicrobial resistance genes [BR:
cste01504
]
H3L98_04235
Chromosome and associated proteins [BR:
cste03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
H3L98_04235
Transporters [BR:
cste02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
H3L98_04235
Antimicrobial resistance genes [BR:
cste01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
H3L98_04235
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
HH_EMRA
YknX_C
HH_YBHG
CzcB_C
BSH_CusB
Beta-barrel_RND_2
rOmpB_passenger
BSH_CzcB
Motif
Other DBs
NCBI-ProteinID:
QMT34204
LinkDB
All DBs
Position
756872..758215
Genome browser
AA seq
447 aa
AA seq
DB search
MTASKPQRRMWRLTAAAVAACVALTACENKNEKRQQEAMAKMASSKPTVSVLTVYPANIL
LENNLAGRIESVRTTDVVPQITGMVKRRLFDEGAFVRAGQPLYQIDDASYAANLQSAEAA
LLTAQAALAKAQADVARYRPLVEADAISRQEWDAAVAAERSAHAQIKSAEAAIHAAQVNV
RHSQIVAPISGEIGQSLVAEGALVNANSTKMATIRQNDPMYVNITQSATDFIKLKQQLMS
GEKVRNSVVEVSIMLEDGTEYPYKGRLLFADSKVDKATGQMTVRGQIPNPDSLLMDGLYV
RVKLPLAGILDAFLVPQSAVTRGKTDTVMIVNSEGKMEPRTVKIGGEKSGNWVITEGLQA
GDKVVMDGTMVAAMRNAEKVETKEWQPPEDQAALYARPMPASDAEEAHAEDGAPATGVVP
MEQRGIGIRTVPSLSQPEQEAEASAAQ
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgagtaaaccgcagcggcgcatgtggcgtttgacggcagcagcggtggcggcg
tgtgtggcgctgaccgcctgtgaaaacaaaaacgaaaaacgtcagcaagaagccatggca
aaaatggcaagcagcaaacccactgtatcggtattaacggtgtatcctgccaatattttg
ttggaaaataatttggcgggacgcattgagtcggtgcgtaccaccgatgtggtgccgcaa
attacaggcatggttaaacgccgtttgtttgacgaaggggcgtttgtgcgggcaggacag
ccgctgtatcagattgacgatgcttcctatgctgccaatttgcaaagtgccgaagcggct
ttattaaccgcacaggcggcgttggcaaaagcgcaggcagatgtggcgcgttaccgtccg
ttggtggaagccgatgccattagccgtcaggaatgggacgcggcggtggctgcggagcgt
tcggcgcacgcacaaatcaaatctgccgaagcagcgattcacgcggcgcaggtaaatgtg
cgccacagccagattgttgcgcccatttcgggcgaaatcgggcaatcgctggtggcggaa
ggggcgttggttaatgccaattccactaaaatggcaaccatccgccaaaacgacccgatg
tatgtcaatatcacgcaatcggccaccgattttatcaagctgaaacagcagttaatgagc
ggcgaaaaagtccgcaacagcgtggtagaggtcagcattatgctggaagacggaacggaa
tatccgtataaagggcgtttgctgtttgccgattccaaagtggacaaggcaacagggcaa
atgacggtgcgcggacaaatccccaatcccgattctttgctgatggatgggctgtatgtg
cgcgtgaaactgcctttggcggggattttagatgcgtttttggtgccgcaaagcgcggta
acgcgcggtaaaaccgatacggtgatgattgtcaattctgaaggcaaaatggaaccgcgc
acggtgaaaatcggcggcgaaaaaagcggcaattgggtgattaccgaaggtttgcaagca
ggcgataaagtggtgatggacggcacgatggttgccgccatgcgtaatgccgaaaaagtg
gaaaccaaagaatggcagccgcctgaagatcaagctgccctgtatgcccgtcccatgccc
gcttccgatgcggaagaagcccacgctgaagacggcgcaccggcaacaggcgttgtgccg
atggaacagcgcggtatcggcatccgtaccgtgccgtcgctgtcgcagcccgaacaagaa
gcggaagcttccgccgcacaataa
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