KEGG   Corynebacterium striatum: CBE89_08000
Entry
CBE89_08000       CDS       T05059                                 
Name
(GenBank) DNA ligase (NAD(+)) LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
cstr  Corynebacterium striatum
Pathway
cstr03030  DNA replication
cstr03410  Base excision repair
cstr03420  Nucleotide excision repair
cstr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cstr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CBE89_08000
   03410 Base excision repair
    CBE89_08000
   03420 Nucleotide excision repair
    CBE89_08000
   03430 Mismatch repair
    CBE89_08000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cstr03032]
    CBE89_08000
   03400 DNA repair and recombination proteins [BR:cstr03400]
    CBE89_08000
Enzymes [BR:cstr01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     CBE89_08000
DNA replication proteins [BR:cstr03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     CBE89_08000
DNA repair and recombination proteins [BR:cstr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     CBE89_08000
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CBE89_08000
   MMR (mismatch excision repair)
    DNA ligase
     CBE89_08000
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      CBE89_08000
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD HHH_5 Nlig-Ia PTCB-BRCT BRCT_2 DZR_2
Other DBs
NCBI-ProteinID: ART21446
UniProt: A0A2Z2IXY1
LinkDB
Position
complement(1679344..1681386)
AA seq 680 aa
MTVTNSAENSVDIQRKWSELAQEVRKHRELYYNGEPSIPDADFDELFQRLLKLEAEHPEL
AVPDSPTQQVGAAPEGAADIEHLERLYSLDNVFNESEMQDWLNRTPAQTYLTELKIDGLS
IDLVYRDGKLTTAATRGDGRVGEDITANAKVITDIPHELSGTDEYPVPALVEVRGEVYMR
PDEFAEINAARREDGKPTFANPRNAAAGGLRMKDPNEVKKRRLHMVCHGIGAREGFQPSS
QHDAYKALEAWGFPVSPYTKQVKSAAAVQKEVKHWAEHRHDAYFEMDGLVVKVDDLASQR
ALGATSRAPRWAIAYKYPPEEVTTKLLDIEVGVGRTGRITPFAVMEPVFVSGSTVSKATL
HNQFEVKNKGVMIGDTIIIRKAGEIIPEVLGPVLELRDDSVHEWVFPENCPSCGTKLAPQ
KDGDQDWRCPNTRSCPAQLSARLEYLASRKALDIEALGEKAAIDLIESGVLGDEADLFEL
DEEKLLKSSMYTTKAGKLNAQGKKLLKNLESARETDFWRVLVSLSIRHVGPIAARALATR
FGSMEALRAASESELADTDGVGGIIAASFKAWFEEDWHRNIVEKWAAAGVTMEDTVTEKL
EQTLEGLTIVVTGTLENFSRDSAKEAIIARGGKASGSVSKKTDYVVVGENAGSKEAKARD
LNLKILDENAFKELLEAGEA
NT seq 2043 nt   +upstreamnt  +downstreamnt
ttgaccgtgactaactctgcagaaaactccgtagatatccaacgaaagtggtccgagctt
gcgcaagaagtgcgcaagcaccgcgagctctattacaacggtgagccttcgatccctgac
gctgactttgacgagctgttccagcgcctgctcaagcttgaggcagagcatcctgagttg
gctgttcctgattcgcccacccaacaggttggcgcggcgccggagggtgctgcggatatt
gagcacttggagcgcctctacagcttggacaatgttttcaatgaatcggagatgcaggat
tggctcaaccgaacgccggcgcagacgtacctgactgagctgaagattgacggcctgtcc
atcgacttggtctatcgggatggcaagctgaccacggcggcaacgcgtggcgacggccgc
gtgggggaagacatcaccgccaatgccaaggtgattacggatatcccgcacgagctgagc
ggcaccgatgagtatccagtgccggcgttggttgaggttcgcggcgaggtctacatgcgc
cctgacgagtttgcagaaatcaacgcggcgcgccgcgaggatggcaagccgacgtttgcc
aacccgcgtaatgctgcggcaggtggcctgcgcatgaaggaccccaacgaggtgaagaag
cgccgcctacacatggtgtgccacggtattggcgcacgtgaaggcttccagccaagctcc
caacatgatgcctacaaggccttggaggcttggggattcccggtctcgccgtacaccaag
caggttaaatcagcggccgcagtgcagaaggaagtcaagcactgggcggaacaccgtcat
gacgcctattttgagatggacggcctcgtggtcaaggtcgacgacttggcttcgcagcgt
gcgttgggtgcgacgtcgcgcgcgccgcgctgggccatcgcttataaatacccgcctgag
gaggtgaccaccaagctgctggacattgaggtaggagtgggtcgcacgggcaggatcacg
ccattcgcggtgatggagccggtgtttgtctcaggctccacggtgtcgaaggcgaccctc
cacaatcagttcgaggtcaagaacaagggcgttatgattggggacaccatcatcatccgc
aaggcgggcgagattatccctgaggtgcttgggccggttctggagctgcgggatgactcc
gtgcacgagtgggtatttccggagaactgcccgtcttgtggcactaagcttgccccacag
aaggacggcgaccaagactggcgttgcccgaatacgcgcagctgcccggcacagttgtcg
gcacgcttggagtacctggcttcacgcaaagcgctggacatcgaagcgttgggggagaag
gccgccattgacctaatcgagtcgggcgttttaggagacgaggctgacctctttgaactg
gacgaagaaaagttgctgaagtcctcgatgtacaccaccaaggctggcaagctcaacgcg
caaggcaagaaactactgaaaaatttggaaagtgcccgcgagactgacttttggcgggtc
ctggtgagcctttcgattcgccacgttggcccgattgctgcgcgcgcactggcgacgagg
ttcgggtcgatggaggcgctacgcgcagcgtcggaaagcgagctcgcggataccgacggc
gtaggtgggatcatcgcggcgtcgtttaaggcgtggttcgaggaagattggcatcgcaac
atcgtcgagaagtgggctgccgcaggcgtgaccatggaagacacggtcaccgaaaaacta
gagcagacgctggaggggcttacgatcgtcgtaaccggcacgctggagaacttctcccga
gactcggcgaaggaggccatcatcgcaaggggaggtaaggcctcgggctcggtttcgaag
aagaccgattatgtcgtggttggtgagaatgccggctcgaaggaggcgaaggcgcgggat
ttgaacttgaaaatccttgatgagaatgcctttaaggagctgttggaagctggggaggct
tag

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