Litchfieldia suaedae: IM538_05120
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Entry
IM538_05120 CDS
T08143
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
csua
Litchfieldia suaedae
Pathway
csua00270
Cysteine and methionine metabolism
csua00450
Selenocompound metabolism
csua00670
One carbon pool by folate
csua01100
Metabolic pathways
csua01110
Biosynthesis of secondary metabolites
csua01230
Biosynthesis of amino acids
csua04980
Cobalamin transport and metabolism
csua04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
csua00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
IM538_05120 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
IM538_05120 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
IM538_05120 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
IM538_05120 (metH)
04980 Cobalamin transport and metabolism
IM538_05120 (metH)
Enzymes [BR:
csua01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
IM538_05120 (metH)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
S-methyl_trans
Met_synt_B12
Pterin_bind
B12-binding
B12-binding_2
CdhD
MtrH
Motif
Other DBs
NCBI-ProteinID:
QOR67525
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Position
complement(979334..982783)
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AA seq
1149 aa
AA seq
DB search
MANSIIEQQMKKKILVIDGAMGTMIQVANLTASDFGGEEYEGCNEYLSLTTPQLIKTIHE
EYLLAGADIIETNTFGATSLVLDEYNLGHLSYEINVKSAQLAKQATLTYSSEEWPRFVAG
SMGPTTKTLSVTGGTTFEALIETYEEQARGLIDGGVDLLLLETSQDMLNVKAGFIGISEA
FKKTGKNLPLIVSGTIEPMGTTLAGQTIEAFYLSLEHMNPLAVGLNCATGPEFMTDHLRS
LSSLANTAVSCYPNAGLPDEEGQYHETPESLARKLKAFAEKDWLNIVGGCCGTTPDHIRA
IANAVKDCNPRSLPDTTHPHAVSGIEPLIYEEDMRPLFVGERTNVIGSRKFKRLIAEGKF
EEASEIARAQIKNGAHVIDICLADPDRDELEDMENFLRFVTKKVKVPLVIDSTDDKVIER
ALKYSQGKAIINSINLEDGEERFDQVVPLLKRYGGAIVVGTIDEIGMAVTAERKIEIAKR
SYELLVEKHGLNPKDIIFDPLVFPVGTGDEQYIGSATETVRGIELIKKELPDCLTILGVS
NVSFGLPPVGREVLNAVYLYHCTQAGLDYAIVNTEKLERFASIPKSEIQLAENLLFNTDR
RILEEFTNFYREKKKEVKISTTTMTLEERLASYVVEGTKEGLLSDLEIALSKYNDPLQII
NGPLMAGMSEVGVLFNNNELIVAEVLQSAEVMKAAVSFLEPHMEKQEDNNGKGKVLLATV
KGDVHDIGKNLVDIILSNNGFKVVDLGIKVTPQALIAAIQEEKPDLVGLSGLLVKSAQQM
VVTAQDLQQAGISVPILVGGAALSRKFTDNKIAPEYTGPVLYAKDAMDGLSLANRIQEKD
YLQEIVKEAHHKRERQKYLLEKQIESSTSSVAVMKRSSVSTLVSVFKPVDTKRHILRNIS
VPQIKPYINMQMLLGHHLGLKGNIENLIEAKDEKALSIKEVVDQLIDLVTTENLISPSAL
YQFFPAQSDGNDVLVYDPKDKKTVIERFTFPRQQKGSYLCIADYLKPVSSGEMDYVGFFA
VTAGTGIRGLAQTFKEQGDFLKSHAIQALALEMAEGLAERVHQLMRDHLGIPDGPDFSMK
DRFAAKYQGQRFSFGYPACPNLEDQEKLFSVISPQDIGIQLTDGFMMEPEASVTAIVFAH
PEARYFNVL
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atggctaattcaataatagaacagcaaatgaaaaagaaaattctagtgatagatggtgca
atgggtacaatgattcaagttgcaaatctcactgcatctgattttggtggtgaggagtac
gaaggctgtaatgagtatctttcactgactacaccccaactgataaagaccattcatgaa
gaatacctcttggccggtgcagatattattgaaacaaacacgttcggggctactagttta
gttttagatgaatataacctaggtcatttatcgtacgaaataaatgtaaagtcagctcag
ttagcaaaacaagcaacattaacttattcttcagaagagtggcctaggtttgtagcaggt
tctatggggccaactacaaagaccttatctgttacaggtggaactacttttgaagctcta
attgaaacgtatgaggaacaagctcgtggattgatagacggtggtgtagatttacttttg
ttagagaccagtcaagatatgttaaatgttaaggcgggttttattgggattagtgaggca
tttaagaaaacgggaaaaaacctccctcttatagtttcaggaacgatagaaccaatgggt
acaacattagccgggcaaacgattgaagccttctatttatccctagaacatatgaacccg
cttgctgttggtcttaattgtgcaacaggtccagagtttatgacagatcatctacggtcc
ttatcaagcctagcaaatacagcagttagttgttatccaaatgctggtcttccagacgaa
gaaggtcaatatcatgaaacacctgaatcactagctagaaaacttaaagcttttgctgaa
aaagattggttaaacattgttggcgggtgttgtggaactactcctgaccacatcagagcc
attgcgaatgctgtgaaagattgtaaccctagatctcttcctgatacaacacatccacat
gctgtttctggaattgaacctctcatttatgaagaggatatgcgtccgttatttgtaggg
gaacgaaccaatgtgattggatcaagaaaatttaaacgtcttattgcagaaggtaaattt
gaagaggcttcggaaattgcacgtgctcaaataaaaaatggtgctcatgtgattgatata
tgtcttgcagaccctgatcgggatgagcttgaagatatggaaaatttccttagattcgta
actaagaaggtaaaggttcctcttgtaatcgactctaccgatgataaagtgattgagcgg
gcgttaaaatactcacaaggtaaagcaatcattaattctattaatcttgaagatggagag
gaacgctttgaccaggttgttcccttattaaaaaggtatgggggagcaattgttgtcggc
acaatcgacgaaataggaatggccgtaacagcagagagaaagatagagatcgcaaaacgt
tcttatgagttattagtagaaaaacatggactgaatccaaaggacattatctttgaccct
cttgtttttccagtcggaacaggtgatgagcagtatataggctcagcaactgaaacagtt
cgaggaattgaacttattaaaaaagaattaccagattgcttaacgatccttggagtaagt
aatgtttcctttggattgcctccagttggacgtgaagtgcttaatgctgtttacttatat
cactgcactcaagcaggtctcgattacgccattgtgaatacagaaaaactcgagcgcttt
gcttctattccgaaaagtgaaattcaacttgcagagaatttactctttaatacagaccgg
cgtatcttagaagagtttacaaacttttatcgtgaaaaaaagaaagaagttaaaatttca
acaacgacaatgacgcttgaagaacgccttgcttcttatgttgttgaaggtacgaaggaa
gggttactatccgatttagagattgctttaagtaagtacaatgaccctttacagatcata
aacggcccccttatggctggaatgtcagaggtcggtgttttgtttaataacaatgagttg
attgttgctgaggttttacaaagtgctgaagtcatgaaagcagctgtttcgtttcttgag
ccacatatggaaaaacaggaagacaataatggcaaagggaaagttctacttgccacagtc
aaaggcgatgttcatgatattggaaaaaacctagttgatattattttaagcaataatggg
tttaaagttgtggaccttgggattaaagttacaccgcaggctctgatagctgcaattcag
gaagagaagcctgacctggttggattatctggattgctagttaaatcagctcaacaaatg
gtcgtaactgctcaagatttacaacaagctggtatctctgttcctattttagtaggtgga
gctgcattatctcgtaaatttacagataacaaaatcgctcctgaatacactggtcctgta
ttatatgcaaaggatgcgatggacggattgtccttggctaaccgcatacaagaaaaagat
taccttcaagaaatagtaaaagaagctcaccataagcgtgagaggcagaaatatctgcta
gaaaaacaaatagaatcatctacatcatctgtagctgtaatgaaacggtctagtgtttca
actctggttagtgtgttcaaacctgttgatacgaaacgtcatattttacgaaatatctct
gtacctcaaataaagccctatattaatatgcaaatgctacttgggcaccacttaggttta
aagggcaatattgagaacctcattgaggctaaagatgaaaaggcactttctattaaggag
gttgtcgatcagttaatcgatttggtaacgacggaaaaccttattagtccatctgctctt
tatcagttttttcctgctcaaagtgatgggaatgacgtgcttgtttatgaccctaaggat
aagaagacggtcattgaaaggttcaccttccctcgtcagcaaaagggatcatatttatgt
attgcggattatttaaagcctgtttcaagtggtgaaatggattatgttggtttcttcgca
gtaaccgctggcacggggattagagggttagcacaaacgtttaaggaacaaggtgatttc
ttaaagtctcatgccatccaagcattagcacttgaaatggcagaaggacttgccgaaaga
gtgcatcaactgatgagggaccatttagggattcctgatggaccagatttttcaatgaaa
gatcgatttgctgcaaagtaccaaggtcaacgtttctccttcgggtatccagcttgtcct
aatttagaggatcaggaaaaattgttttcggtaatttcccctcaggatattgggatacaa
ttaacggatggttttatgatggagcctgaagcttccgttactgccattgtatttgctcac
cctgaagcaaggtattttaatgttttatga
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