Capricornis sumatraensis (Sumatran serow): 138069409
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Entry
138069409 CDS
T10522
Symbol
TAP1
Name
(RefSeq) antigen peptide transporter 1
KO
K05653
ATP-binding cassette, subfamily B (MDR/TAP), member 2 [EC:
7.4.2.14
]
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum02010
ABC transporters
csum04145
Phagosome
csum04612
Antigen processing and presentation
csum05163
Human cytomegalovirus infection
csum05168
Herpes simplex virus 1 infection
csum05169
Epstein-Barr virus infection
csum05170
Human immunodeficiency virus 1 infection
csum05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
138069409 (TAP1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
138069409 (TAP1)
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
138069409 (TAP1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
138069409 (TAP1)
05168 Herpes simplex virus 1 infection
138069409 (TAP1)
05163 Human cytomegalovirus infection
138069409 (TAP1)
05169 Epstein-Barr virus infection
138069409 (TAP1)
09163 Immune disease
05340 Primary immunodeficiency
138069409 (TAP1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csum02000
]
138069409 (TAP1)
Enzymes [BR:
csum01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
138069409 (TAP1)
Transporters [BR:
csum02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
138069409 (TAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_21
ABC_ATPase
AAA_22
AAA_29
AAA_25
AAA_23
AAA_15
Zeta_toxin
AAA_30
SRP54
AAA_33
AAA_5
Motif
Other DBs
NCBI-GeneID:
138069409
NCBI-ProteinID:
XP_068816798
LinkDB
All DBs
Position
22:complement(12130856..12139504)
Genome browser
AA seq
750 aa
AA seq
DB search
MACPGSPAPCGRPRLPRVAVAWLGTALLLLADWTLLRPALPRVASRLVPPALPLLRVWVA
GLSRWALLWLGARGVVGAALGFRRESTRVLGWLAVLEPLAAALGLALPGLALFRELVSWQ
APEDTDSAGPLHWGSRLDAFALSYWAALPAATLWYKIRSLCVQGARGAFGLAMSRLLVFL
GPEKSHVQFILALVFLSCLGEMAIPFYTGRLTDWIVQDETAAAFTRNVTLMSVLTIASAV
LEFTADGIYNSTVGRMHSHLQGEVFQAVLRQETEFFQKNQAGEITSRVTDDTSTMSESLS
SDLSLLLWYLIRGLCLLGLMLWTSPSLTVVTLVALPLLFLLPKKLGKWHKMLAEQMQESL
AKSSQVAIEVLSAMPTVRSFANEEGEAQKFRRKLREMMVLSRKEALAYAVDLWTVSVSGM
LLKVGILYFGGQLVTSGSVSSGHLVTFILYQIQFTIAVQVLLSSYPRVQKAVGSSEKIFE
YLDRVPNCPESGSLASLTLRGLVQFQGVSFAYPNHPDAPVLQGLTFTLCPGEVTALVGPN
GSGKSTVAALLQNLYQPTEGQVLLDGEPLPKYEHRYLHRQVAAVGQEPLLFGRSFKENIA
YGLVQEPTMEEITAAAVESGAHGFISELPEGYDTEVGEAGSQLSGGQRQAVALARALIRR
PSVLILDDATSALDANNQSLVERLLYESPERGSRSVLFITQRLSSVEQADRILFLEGGTI
IEAGTHQQLMMNEGRYWAMVQAPGGPGAPE
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggcctgcccggggtccccagctccctgcggccgtccgcgcctcccccgcgtcgccgtc
gcgtggctggggacggcgctgctgctcctcgccgactggacgctgctccggccggcgctg
ccccgagtggcctcgcggctggtgccccctgcgctgccgctgctccgggtctgggtggcc
ggcctgagccgctgggcgctgctgtggctgggggcccgcggcgtcgtcggggccgcgctg
ggcttccggagggaaagcacgcgagtcctcgggtggctggctgttttggagccgctggcg
gcggcgctgggcttggccctgccgggactcgccttgttccgagagctggtctcctggcaa
gcccccgaggacacggacagcgccgggcccctgcactggggaagtcgcctggacgccttc
gctctcagctactgggcggcactgcccgcggccaccctgtggtataagatcaggagcctc
tgcgtgcaaggagctcgcggggcttttggcctggcgatgagccggcttttagtcttcctg
ggtccggagaaaagccacgtgcagttcattttggccctggtgtttctctcctgtcttggg
gagatggccattccgttctacactggccggctcaccgactggattgtacaggatgagaca
gccgctgccttcacccggaatgtaaccctcatgtcggtcctcaccatagccagcgcagtg
ctggagttcacagctgatggaatctacaacagcaccgtgggccggatgcacagccacctg
cagggagaggtgtttcaggctgtcctgcgccaggagacagagttttttcaaaagaaccaa
gcaggtgaaatcacatctcgggtgacagatgacacgtccaccatgagtgagtctctgagt
tcggatctcagcctgttgctgtggtacctcatccggggactgtgtctcctggggctcatg
ctctggacgtccccgtccctcactgtggtcaccctggtcgccctgcccctgctcttcctt
ctgcctaagaagctggggaaatggcacaagatgctggcagaacagatgcaagaatctctg
gcaaagtccagccaggtggccatcgaggtgctgtcagccatgcctacagttcggagcttt
gccaatgaagagggtgaggcccagaagttcaggcgaaagctgcgcgagatgatggtgctc
agccggaaggaggccctggcctacgcggtcgacctctggaccgtctctgtctcagggatg
ctgctgaaggtgggaatcctgtattttggtgggcagctggtgacaagtgggtctgtcagc
agtgggcatctggtcacctttattctgtaccagatccagttcaccatagctgttcaggtg
ctgctgtccagctaccccagggtacagaaggctgtgggctcttcagagaaaatatttgaa
tacctggaccgggtccctaactgcccagagagtgggtcattggcttccttaaccttgcgc
ggcctcgtccagttccagggtgtctcctttgcctacccaaaccatccggatgcccctgtg
ctacaggggctgaccttcaccctttgtcctggtgaggtgacggcgctggtggggcccaac
gggtctgggaagagcacggtggctgcgctgctgcagaacctgtaccagcccactgagggc
caggtgctgctggatggggagccccttcccaaatacgagcaccgctacctgcacagacag
gtggctgctgtgggacaagagcctctgctgtttggaagaagctttaaagaaaatattgcc
tacggcctggtccaggagccgaccatggaggagatcacagctgctgcggtggagtccgga
gcccatggttttatctctgagctccctgagggctacgacacagaggtgggtgaggctggg
agccagctgtccgggggccagcgtcaggcagtggccttggctcgagccctgatccggaga
ccaagcgtactcattctggatgatgctaccagcgccctggatgcaaacaaccaatccctg
gtggagcggctgctctatgaaagccctgagcggggctctcggtcagtgcttttcatcacc
cagcgcctcagttcggtggagcaggctgaccgcatcctctttctggaaggaggcacgatc
attgaggcaggaactcaccagcagctcatgatgaatgaaggacgctattgggccatggtg
caggctcctggcgggccaggggctccagaatga
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