KEGG   Capricornis sumatraensis (Sumatran serow): 138069499
Entry
138069499         CDS       T10522                                 
Name
(RefSeq) SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like
  KO
K06752  MHC class II antigen
Organism
csum  Capricornis sumatraensis (Sumatran serow)
Pathway
csum04145  Phagosome
csum04514  Cell adhesion molecules
csum04612  Antigen processing and presentation
csum04640  Hematopoietic cell lineage
csum04658  Th1 and Th2 cell differentiation
csum04659  Th17 cell differentiation
csum04672  Intestinal immune network for IgA production
csum04940  Type I diabetes mellitus
csum05140  Leishmaniasis
csum05145  Toxoplasmosis
csum05150  Staphylococcus aureus infection
csum05152  Tuberculosis
csum05164  Influenza A
csum05166  Human T-cell leukemia virus 1 infection
csum05168  Herpes simplex virus 1 infection
csum05169  Epstein-Barr virus infection
csum05310  Asthma
csum05320  Autoimmune thyroid disease
csum05321  Inflammatory bowel disease
csum05322  Systemic lupus erythematosus
csum05323  Rheumatoid arthritis
csum05330  Allograft rejection
csum05332  Graft-versus-host disease
csum05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:csum00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    138069499
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    138069499
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    138069499
   04612 Antigen processing and presentation
    138069499
   04658 Th1 and Th2 cell differentiation
    138069499
   04659 Th17 cell differentiation
    138069499
   04672 Intestinal immune network for IgA production
    138069499
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    138069499
   05164 Influenza A
    138069499
   05168 Herpes simplex virus 1 infection
    138069499
   05169 Epstein-Barr virus infection
    138069499
  09171 Infectious disease: bacterial
   05150 Staphylococcus aureus infection
    138069499
   05152 Tuberculosis
    138069499
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    138069499
   05140 Leishmaniasis
    138069499
  09163 Immune disease
   05310 Asthma
    138069499
   05322 Systemic lupus erythematosus
    138069499
   05323 Rheumatoid arthritis
    138069499
   05320 Autoimmune thyroid disease
    138069499
   05321 Inflammatory bowel disease
    138069499
   05330 Allograft rejection
    138069499
   05332 Graft-versus-host disease
    138069499
  09166 Cardiovascular disease
   05416 Viral myocarditis
    138069499
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    138069499
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csum04147]
    138069499
Exosome [BR:csum04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   138069499
  Exosomal proteins of epithelial cells
   138069499
  Exosomal proteins of breast milk
   138069499
SSDB
Motif
Pfam: MHC_II_alpha C1-set Ig_3 Ig_2 I-set
Other DBs
NCBI-GeneID: 138069499
NCBI-ProteinID: XP_068816918
LinkDB
Position
22:complement(30098816..30104924)
AA seq 255 aa
MVLNRALILGALALTTMMSPSRGEDIVADHFGSYGTTIYQSHGPSGQFTQEFDGDELFYV
DLEKKETVWRLPMFSQFAGFDPQGALSNIATAKHNLDILTKRSNSTPVINEVPEVTVFSK
SPTMLGQPNTLICHVDNIFPPVINITWLKNGHAVTEGVYETSFLPKDGHSFFKIGYLTFL
PSDDDVYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLTVGLVGIVVGTTFII
QGLRSGGASRHQGPL
NT seq 768 nt   +upstreamnt  +downstreamnt
atggtcctgaacagagctctgattctgggggccctcgccctgaccaccatgatgagcccc
agtagaggtgaagacattgtagctgaccactttggctcctatggcacaactatctaccaa
tctcatggtccctccggccagttcacccaggaatttgacggagatgagctgttttatgtg
gacctggaaaagaaagagactgtctggcggctgcctatgtttagccagtttgcaggtttt
gaccctcaaggtgcactgagtaacatagctacagcgaaacacaacttggatatcctgact
aaacgctccaactctaccccagttatcaacgaggttcctgaggtgactgtgttttccaag
tctcccacgatgctgggtcagcccaacaccctcatctgtcacgtggacaacattttcccc
cctgtgatcaacattacatggctgaagaatgggcatgcagtcacggagggtgtttatgag
accagcttcctccccaaggatggtcattccttcttcaagattggttatctcaccttcctc
ccttctgatgatgacgtttatgactgcaaagtggagcactggggcctggatgagccgctg
ctcaaacactgggagcctgagattccagcgcctatgtcagagctgacggagactgtggtc
tgtgccctggggttgaccgtgggcctcgtgggcatcgtggtgggcaccaccttcatcatc
caaggcctgcgctcaggtggggcctccagacaccagggtcccttgtga

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