Capricornis sumatraensis (Sumatran serow): 138070197
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Entry
138070197 CDS
T10522
Symbol
SLIT1
Name
(RefSeq) slit homolog 1 protein
KO
K06838
slit 1
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
138070197 (SLIT1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
csum00536
]
138070197 (SLIT1)
Glycosaminoglycan binding proteins [BR:
csum00536
]
Heparan sulfate / Heparin
Axon guidance molecules
138070197 (SLIT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
Laminin_G_1
hEGF
LRRNT
LRRCT
LRR_1
LRR_9
EGF_TEN
LRR_14
EGF_DL_JAG
EGF_Teneurin
LRR_EndoS
EGF_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
138070197
NCBI-ProteinID:
XP_068817442
LinkDB
All DBs
Position
23:complement(18758870..18928777)
Genome browser
AA seq
1534 aa
AA seq
DB search
MALTPMRGPSALLVRPALWLLLWAASWRLGATGCPALCTCAGTTVDCHGTGLRAVPKNIP
RNTERLELNGNNITRIHRNDFAGLKQLRVLQLMENQIGVVERGAFDDMKELERLRLNRNL
LHTLPELLFQNNQALSRLDLSENTIQAIPRKAFRGATDLKNLQLDKNQIGCIEEGAFRAL
RGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPAVGLFT
QCSGPAGLRGLNVAEVQKSEFSCSGQGEAGRTPSCTLSSGSCPAMCACSNGIVDCRGKGL
TAIPANLPEAMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLN
SLVLYGNKITDLPRGVFGGLFTLQLLLLNANKINCIRLDAFQDLQNLSLLSLYDNKIQSL
AKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRSNPIETSGARCASPRRLANKRIGQI
KSKKFRCSAKEQYFIPGTEDYQLNSECNSDVVCPHKCRCEASMVECSSLKLTKIPERVPQ
ATAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQ
LESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTL
QALSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQDVASPDFRCE
EGQEEGGCLPRPQCPQECACLDTVVRCSNKHLQTLPKGIPKNVTELYLDGNQFTLVPAQL
STFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLH
GNDISTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSSWVKTGYKEPGIARCAGPPDME
GKLLLTTPAKKFECQGPPTLTVQAKCDPCLSSPCQNQGTCRNDPLEVYKCACPSGYKGRD
CEVSLDSCSSTPCGNGGTCHSQEGEDAGFTCSCPTGFEGPTCEVDTDDCMGHSCANGGTC
VDGVGNYTCQCPLQYSGRACELLVDFCAPDLNPCQHEAQCVGTPDGPRCECAPGYAGGNC
TENQDDCRDHRCQNGAQCVDEVNGYSCLCTQGYSGQLCETPPRPPAPRSPCEGTECQNGA
NCVDQGNGPVCQCLPGFGGPECEKLLSVNFVDRDTYLQFTDLQNWPRANITLQVSTAEDN
GILLYNGDNDHIAVELYQGHVRVSYDPGSYPSSAIYSTETINDGQFHTVELVTFDQMVNL
SIDGGSPMTMDNFGKHYTLNSDAPLYVGGMPVDVNSAAFRLWQILNGTSFHGCIRNLYIN
NELQDFTKTRMKPGVVPGCEPCRKLYCLHGICQPNATPGPVCHCEAGWGGLHCDQPADGP
CHGHKCVHGECVPLDALSYSCQCQDGYSGALCNQAGAPADPCGGLRCLRGHCQASATKGA
HCVCDPGFSGELCEQESECRGYPVRDFHQVQRGYAICRTTRPLSWVECRGSCPGQGCCQG
LRLKRRKFTFECSDGTSFAEEVEKPSKCGCALCA
NT seq
4605 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgacacccatgagggggccctcggcgttgctcgtccggccagcgctctggctg
ctgctgtgggcagcctcgtggcgcctgggtgccacggggtgccccgccctctgcacctgc
gctggcaccacggtggattgccatggcaccgggctgcgggccgttcccaagaacatcccg
cggaacacggagcgcctggaactcaatggcaacaacatcactcggatccacaggaacgac
ttcgcgggactcaagcagctgcgggtgctgcagctgatggagaaccagattggagtggtg
gaacggggggcttttgatgacatgaaggagctggagcggctacgactcaaccggaacctg
ctgcacacgttaccagagctgctgttccagaataaccaggctctgtcaaggctggaccta
agtgagaacaccatccaggccatccccagaaaggctttccgtggagctacagatctcaaa
aatttacagctagacaagaaccagattggctgcattgaggaaggagctttccgggctctg
cgggggttagaggtgctgaccctgaacaacaacaacatcaccaccatcccggtgtccagc
ttcaaccacatgcccaagctgcggaccttccgcctgcactccaaccacctgttctgtgac
tgccacctggcctggctctcccagtggctgaggcagcggccagccgtcgggctcttcacc
cagtgctcgggccccgctggcctgcgcggcctcaacgtggctgaggtccagaagagtgag
ttcagctgctcaggccagggggaggcagggcgcacgccctcctgcaccctctcctccggc
tcctgtccggccatgtgcgcctgcagcaacggcatcgtggattgtcgtggcaaaggcctg
accgccatccctgccaatctgcccgaggccatgacagagatccggctggagctcaatggg
atcaagtccatccccccaggggccttctctccctacagaaagctgcggaggatagacttg
agcaacaaccagatctcggagattgcgcctgatgccttccagggcctccggtccctgaac
tcactggtcctctacgggaacaagatcacagacctcccccggggcgtgtttggaggcctg
ttcaccctacagctcctgctcctgaatgccaacaagatcaactgcatccggctcgacgcc
ttccaggatctgcagaacctctcactgctctccctgtatgacaacaagatccagagtctt
gctaagggcaccttcacctccctgcgggccatccagaccctgcatctggcccagaacccc
ttcatctgtgactgtaacctcaagtggctggcagacttcctacgctccaaccccatcgag
accagtggggcccgctgcgccagcccccgacgcctcgccaacaaacgcatcggccagatc
aaaagcaagaagttccggtgctcagccaaagagcagtacttcattccaggcactgaggat
taccagctgaacagcgagtgcaatagcgacgtggtctgtccccacaagtgccgctgcgag
gccagcatggtggagtgctccagcctgaagctcaccaagatccctgagcgcgtaccccag
gccacggctgagctacgattaaacaacaatgagatttccatcctggaggccacagggatg
tttaaaaaactcacccatctgaagaaaatcaatctgagcaacaacaaggtgtcggagatt
gaagatggggcctttgagggcgcagcctcagtgagcgagctgcacctgaccgccaaccaa
ctggagtccatccggagcggcatgttccggggcttggatggcctgagaacgctgatgcta
aggaacaaccgcatcagctgcatccacaacgacagcttcacgggcctgcgcaacgtgcgc
ctcctctcgctctacgacaaccagatcgccaccatctccccgggagccttcgacacgctc
caggccctctccacgctaaaccttctggccaaccctttcaactgcaactgccagctggcg
tggctgggcgactggctgcgcaagaggaagatcgtgacggggaacccgcggtgccagaac
ccagacttcttgcggcagattcccctgcaggacgtggcctcccccgacttcaggtgtgaa
gaaggccaggaggaggggggctgcctgccccgcccacagtgcccccaggagtgcgcctgc
ctggacactgtggttcgatgcagcaacaagcacctccagaccctgcccaagggcatcccc
aagaatgtcacagagctctacctggatgggaaccagttcacgctggttccagcacagctg
tccaccttcaagtacctgcagcttgtggacctgagtaacaataagatcagttccttaagc
aattcgtccttcaccaacatgagccagctgaccactctgatcctcagctacaacgccctg
cagtgtatccctcctctggccttccaggggcttcgctccctgcgcctgctgtccctgcat
ggcaatgacatctccaccctccaagaaggcatctttgcagacgtgacttccctgtctcac
ctggccatcggtgccaaccccctgtactgtgactgccacctgcgctggttgtccagctgg
gtgaagacaggctacaaggaaccgggcattgcccgctgtgctgggcccccggacatggaa
ggcaaactgctcctcaccacgcctgccaagaagtttgaatgccaaggtccccctaccctg
actgtccaggccaagtgtgatccctgcttgtccagcccgtgccagaaccagggcacctgc
cgcaacgacccccttgaggtgtacaagtgtgcctgccccagtggctacaagggccgagac
tgtgaggtgtccctggacagctgttccagcaccccctgtggaaacggtgggacctgccac
tcacaggagggcgaggatgctggcttcacgtgctcctgccccaccggttttgaagggcca
acctgcgaggtagacacggatgactgtatggggcactcctgtgccaatgggggcacctgt
gtggacggcgtgggcaactacacctgccagtgccccctgcagtactcgggaagagcctgt
gagctgctggtggacttctgcgctccagatttgaacccgtgtcagcatgaggcccagtgt
gtgggcacccccgatgggcccaggtgtgagtgtgcaccaggttacgcgggtggcaactgc
actgagaaccaggatgactgcagggaccaccgctgccagaatggggcccagtgtgtggat
gaagtcaatggctactcctgcctctgtacccagggctacagtggtcagctctgtgagacc
cctcccagaccacctgcccccaggagcccctgtgaagggactgagtgccagaatggggcc
aactgtgtggatcagggcaacgggcccgtgtgccagtgcctcccaggctttggcggccct
gaatgtgagaagctgctcagtgtgaacttcgtggatcgggacacctacttgcagttcacg
gacctgcagaactggccgcgggccaacatcacgctgcaggtctccacggcagaagacaac
ggaatcctgctgtacaatggggacaacgatcacattgcagtggagctctaccagggccat
gtgcgtgtcagttacgacccggggagctatcccagctctgccatctacagcaccgagaca
atcaacgatgggcagttccacacagttgagctggtcacctttgaccagatggtgaatctc
tccattgatggcggcagccccatgaccatggacaacttcggcaaacactacacactgaac
agcgacgcccccctctatgtgggagggatgccggtggatgtgaattcggctgccttccgc
ctgtggcagatcctgaatggcaccagcttccacggctgcatccgaaacctgtacatcaac
aacgagttgcaggacttcaccaagacacggatgaagccaggcgtggtgccaggctgcgag
ccctgccggaaactctactgcctgcacggcatctgtcagcccaatgccaccccggggccc
gtgtgccactgcgaggccggctgggggggcctgcactgtgaccagccagccgacggcccc
tgccatggccacaagtgtgtccatggggagtgcgtgcctctggatgctctttcctacagc
tgccagtgccaggatgggtactcgggggccctgtgcaaccaggccggggcacctgcagac
ccctgtgggggcctgcggtgcctgcgtggccactgccaggcctcagccaccaagggggca
cactgtgtgtgtgaccctggcttttcgggcgagctgtgtgagcaagagtccgaatgccgg
gggtaccctgtccgggactttcaccaggtccagaggggctatgccatctgccggaccacg
cgccctctgtcgtgggtggagtgccggggttcatgtccgggccagggctgctgccagggc
ctgcggctgaagcggaggaagttcacctttgagtgcagcgacgggacctcttttgccgag
gaggtggagaagccctccaagtgtggctgtgccctctgcgcgtag
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