Capricornis sumatraensis (Sumatran serow): 138070962
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Entry
138070962 CDS
T10522
Symbol
TRPC5
Name
(RefSeq) short transient receptor potential channel 5
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum04360
Axon guidance
csum04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
138070962 (TRPC5)
09158 Development and regeneration
04360 Axon guidance
138070962 (TRPC5)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csum01009
]
138070962 (TRPC5)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csum04040
]
138070962 (TRPC5)
Protein phosphatases and associated proteins [BR:
csum01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
138070962 (TRPC5)
Ion channels [BR:
csum04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
138070962 (TRPC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
YVC1_C
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
138070962
NCBI-ProteinID:
XP_068818472
LinkDB
All DBs
Position
X:complement(19010883..19190373)
Genome browser
AA seq
974 aa
AA seq
DB search
MAQLYYKKVNYSPYRDRIPLQIVRAETELSAEEKAFLNAVEKGDYATVKQALQEAEIYYN
VNINCMDPLGRSALLIAIENENLEIMELLLNHSVYVGDALLYAIRKEVVGAVELLLSYRR
PSGEKQVPTLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQKRVTIPRPHQIRCNCVE
CVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEFKAE
YEELSQQCKLFAKDLLDQARSSRELEIILNHRDDHSEELDPQKYHDLAKLKVAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRKHWVVKLLTCMTIGFLFPMLSIAYLISPRSNLGLFI
KKPFIKFICHTASYLTFLFMLLLASQHIVRTDLHVQGPPPTVVEWMILPWVLGFIWGEIK
EMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPREEWEMWHPTLIAEA
LFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETRAIDEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTLPPP
FNIIPSPKSFLYLGNWFNNTFCPKRDPDGRRRRHNLRSFTERHADSLIQNQHYQEVIRNL
VKRYVAAMIRNSKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKHQRRSFSTSSTELSQ
RDDTNDGSGGARAKSKSVSFNVGCKKKACHGPPLIRTMPRVGGAQGKSKAESSSKRSFMG
PSLKKLGLLFSKFNGHMSEPSSEPMYTISDGIVQPHYMWQDIRYSQMEKGKAEACSQSEI
NLSEVELGEARGTAQSTECPLACSSSLHCVSSICSSNSKLLDSSEDVFETWGEACDLLMH
KWGDGQEEQVTTRL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggctcaactgtactacaaaaaggtcaactactcaccgtacagagaccgcatccccctg
cagattgtgagggcagagacagagctctctgctgaggagaaggccttcctcaatgctgtg
gagaagggggactatgccactgtgaagcaggccctccaggaggccgagatctactacaat
gtcaacatcaactgcatggacccactgggccggagtgccctgctcattgccattgagaat
gagaacttggagatcatggagctcctgctgaaccacagcgtgtacgtcggcgatgcactg
ctctatgccatccgcaaggaagtggtgggtgctgtggagcttctgctcagctacaggcgg
cccagtggagagaagcaggtccccactcttatgatggacactcagttctctgagttcaca
ccggacattactcccatcatgctggctgcccacaccaacaactatgagatcatcaaactg
cttgtccaaaaacgggtcactattccccggccccaccagatccgctgcaactgcgtggag
tgtgtgtccagttcagaggtagacagcctgcgccactctcgctcccgactgaacatctat
aaagccctggcaagtccctcactcatagccttatcaagtgaggaccccatcctaactgcc
ttccgcctgggctgggagctcaaggagcttagcaaggtggagaatgagttcaaggctgag
tacgaggagctctcccagcagtgcaagctctttgccaaagacctgctggaccaggctcgg
agctcccgagaactggagatcatcctcaaccatcgagatgaccacagtgaagagcttgac
cctcaaaagtaccatgacctagccaagctgaaggtggccatcaaataccaccagaaagag
tttgtggcccagcccaattgccaacagttgcttgccactctgtggtacgacggcttccct
ggatggcggcggaaacactgggtcgtcaagcttctgacgtgcatgaccattgggttcctg
tttcccatgctgtctattgcttatctcatctcacccaggagcaaccttgggctgttcatc
aagaaacctttcatcaagtttatctgccacacagcatcatatctgaccttcctcttcatg
cttctcctggcttctcagcacatcgtcaggacagacctccatgtacagggacctccccca
actgtcgtggagtggatgatactgccttgggttctcggtttcatttggggggagataaag
gaaatgtgggatggtggatttactgaatacatccatgactggtggaacctgatggatttt
gcaatgaactcactctacctggcaactatttccttgaagattgtagcctatgtcaagtat
aatggttcccgtccaagggaagaatgggaaatgtggcacccgaccctgattgcagaagct
ctctttgcgatatccaacattttaagttcgttgcgtctcatatccctgttcacagccaac
tcccacttagggcctctgcagatctctttggggcgcatgttgctcgatatcctcaaattc
ctctttatctactgcctggtactgctggcttttgccaatggattgaaccagctttacttt
tattatgagaccagagcaatcgatgagcccaacaactgcaaggggatccgatgcgagaaa
cagaacaatgccttctccacgctctttgaaacccttcagtccctcttctggtctgtattt
ggccttttaaatctctatgtcaccaatgtgaaagccagacatgagttcacagagtttgtg
ggagcaaccatgtttgggacatacaatgtcatctccctggtggtgctgctgaacatgctg
atcgccatgatgaacaactcctaccagcttattgctgatcatgctgatattgagtggaag
tttgcaaggacgaagctctggatgagttactttgatgaaggtggcaccttgccacctcct
ttcaacattatccccagccccaagtcatttctataccttggcaactggttcaacaacacc
ttctgccctaaaagagacccggatggtagacggagaaggcacaacttgagaagcttcaca
gaacgccatgctgacagtctgatacagaaccaacattaccaggaagttatcaggaattta
gtcaaaagatatgtggcagctatgataagaaattccaaaacaaatgagggactaacagaa
gaaaattttaaggaattaaagcaggatatctccagctttcgatatgaagtgcttgacctt
ttgggaaacaggaagcaccaaaggagaagcttttccactagcagcactgaactctcacag
agggatgataccaacgatggcagtggtggggctcgggccaaatccaagagtgtctctttc
aatgtaggctgcaagaaaaaagcctgccatgggccacctctcatcaggactatgccaaga
gtcggtggtgcccaaggcaagtcaaaagctgagtcatcaagcaaacgatccttcatgggt
ccctctctcaagaaactgggtctcctattctccaagtttaatggtcatatgtccgaaccc
agttcagagccaatgtacaccatctctgatgggattgttcagccacactatatgtggcag
gacatcagatattctcagatggagaaagggaaagcagaggcctgttctcaaagtgaaatt
aacctcagtgaggtagaattaggtgaagcccggggcactgctcagagcactgaatgccct
ctagcctgttccagctctcttcactgcgtatccagcatctgttcctcaaattctaaactt
ttagactcctcagaggatgtatttgaaacgtggggagaggcttgtgacctgctcatgcac
aaatggggtgatggacaggaagaacaagttacaacgcggctctaa
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