Capricornis sumatraensis (Sumatran serow): 138074234
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Entry
138074234 CDS
T10522
Symbol
SETDB1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum00310
Lysine degradation
csum01100
Metabolic pathways
csum04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
138074234 (SETDB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
138074234 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csum03036
]
138074234 (SETDB1)
Enzymes [BR:
csum01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
138074234 (SETDB1)
Chromosome and associated proteins [BR:
csum03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
138074234 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
138074234 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5604
Tudor_4
Tudor_5
SET
MBD
Pre-SET
Chromo_MORC2_6th
DUF4537
Chromo
Motif
Other DBs
NCBI-GeneID:
138074234
NCBI-ProteinID:
XP_068822405
LinkDB
All DBs
Position
2:complement(121078639..121108055)
Genome browser
AA seq
1287 aa
AA seq
DB search
MSSLPGCIGLAAATAAVESEEIAELQQSVVEELGISMEELRQFIDEELEKMDCVQQRKKQ
LAELETWVIQKESEVAHVDQLFDDASRAVTNCESLVKDFYSKLGLQYRDSSSEDEASRPT
EIIEIPDEDDDVLSIDSGDAGSRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKSSSQDF
HKGTLSQMPGELSKDGDLVVSMRILGKKRTKTWHKGTLIAIQTVGSGKKYKVKFDNKGKS
LLSGNHIAYDYHPPADKLYVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDG
YASYVTQPELYPICRPLKKTWEDIEDISCRDFIEEYITAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSSASALEKKQGGQLRTR
PNMGAVRSKGPVVQYTQDLTSTGTQFKPMEPPQPTAPPAPPGPALSPQAGDSESLEGQLA
QSRKQVAKKSTSFRPGSVGSGHSSPTSPALSENAPGGKPGINQTYRSPLGSTTSAPAPPA
PPAPPAFHGMLERAPAEPSYRAPMEKLFYLPHVCSYTCLSRVRPMRSEQYRGKNPLLVPL
LYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETSCDFLFLEMFCLDPYV
LVDRKFQPYKPFYYILDITYGKEDVPLSCVNEIDTTPPPQVAYSKERIPGKGVFINTGPE
FLVGCDCKDGCRDKSKCACHQLTIQATACTPGGQINPNSGYQYKRLEECLPTGVYECNKR
CQCDPNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFADK
EGLEMGDEYFANLDHIESVENFKEGYESDAPCSSDSSGVDLKDQEDGNSGTEDPEESNDD
SSDDNFCKDEDFSTSSVWRSYATRRQTRGQKENGLSEMSSKDSRPPDLGPPHIPVPPSIP
VGGCNPPSSEETSKNKVASWLSSNSISEGGFADSDSRSSFKTSEGGEGRTGGGRGEAEKA
STSGLGFKDEGDIKQAKKEDPDDRNRMSIVTESSRNYGYNPSPVKPEGLRRPPSKTSMHQ
SRRLVASAQPNPDDILTLSSSTESEGESGTSRKPPAGQTSATAMDSDDIQTISSGSEGDD
FEDKKNMSGPMKRQVAVKSTRGFALKSTHGIAIKSTNMASVEKGESAPVRKNTRQFYDGE
ESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWD
YNYEVGSVEGKELLCCCGAIECRGRLL
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccctccctgggtgcattggtttggcagcagcaacagcagcagtggagtctgaa
gaaattgcagagctgcaacagtccgtggttgaggagctgggtatctcaatggaggagctt
cgacagttcattgatgaagaactggaaaagatggactgtgtacagcagcgcaagaagcaa
ctagcagagttggagacttgggtaatacagaaggaatctgaggtggcccatgttgaccaa
ctctttgatgatgcatccagggcagtgactaactgtgagtctttggtgaaggacttttat
tccaaactgggactacagtaccgggacagcagctctgaagatgaagcttcccggcctaca
gaaataattgagattcctgatgaagatgatgatgtcctcagtattgattcaggtgatgct
gggagcagaactccaaaagaccagaagctccgtgaagctatggctgccttaagaaaatcg
gctcaagatgtccagaagttcatggatgctgtcaacaagaagagtagttcccaggatttt
cacaaaggaaccttgagccagatgcctggagaactgagcaaagatggtgacttggtcgtc
agcatgcgcatcctcggcaaaaaaagaactaagacgtggcacaaaggcacccttattgcc
attcagacggttgggtcaggaaagaagtacaaggtgaaatttgacaacaaaggaaagagt
cttctgtcaggaaaccacattgcctacgattaccaccctcctgctgacaagttgtatgtg
ggcagtcgagtagtggccaaatacaaagatgggaatcaggtctggctctatgctggcatt
gtagctgagacaccaaacgtcaaaaacaagctcaggtttctcatcttctttgatgatggc
tatgcttcctatgttacacagcctgaactatatcccatttgccggccactgaaaaagact
tgggaggacatagaagacatctcctgccgagacttcatagaagagtatatcactgcttac
cccaaccgccccatggtgttgctcaagagtggccagctgatcaagactgagtgggaaggc
acgtggtggaagtcccgagtcgaggaggtggacggcagcctagtcaggatcctctttctg
gatgacaaaagatgtgaatggatctatcgaggctctacacgactggagcccatgttcagc
atgaagacatcatccgcctctgcactagagaagaagcaagggggacagctcagaacacgt
ccaaatatgggtgctgtgagaagcaaaggtcccgtggtccagtacactcaggatctaaca
agtactggaacccagttcaagcctatggaacccccacagccgacagccccacctgcccca
cctggtccagctctgtccccccaggcaggtgacagtgaaagcttggaaggccagcttgcc
caatctcggaagcaggtagccaaaaaaagcacatctttccggccaggatctgtgggctct
ggtcattcctcccctacatcccctgcactcagtgaaaatgcccctggtgggaaacctggg
atcaatcagacatataggtcacctttaggctccacaacctctgccccagctcccccagct
cccccagcacccccagccttccatggcatgctggagcgggcccctgcagagccctcctac
cgtgcccccatggagaagcttttctacttacctcatgtctgcagctatacttgtctgtct
cgagtcagacctatgagaagtgagcagtatcggggcaagaaccctctgttagtcccacta
ctctatgacttccggcgaatgacagcccggcgccgagttaaccgcaagatgggctttcat
gttatctataagacaccctgtggcctctgccttcggacaatgcaggagattgagcgttac
ctttttgagactagctgtgacttcctcttcctggagatgttctgtttggatccgtatgtt
cttgtggaccgaaagtttcagccctataagcctttttactatattttggacatcacctat
gggaaggaagacgttcctctatcctgcgttaacgagattgacacaactcccccaccccag
gtggcctacagcaaggaacggatcccgggcaagggtgttttcattaacacaggccctgaa
tttcttgtcggctgtgactgcaaagatgggtgccgggacaagtccaagtgtgcctgccat
cagctaactatccaggctacagcctgcaccccaggaggccaaatcaaccccaactctggc
taccaatacaagagactagaagaatgtctgcccacaggagtttatgagtgtaacaaacgc
tgccaatgtgaccctaacatgtgcacaaaccggttggtacagcatggcctgcaagttcgt
ctgcagctcttcaagacccagaacaagggctggggtatccgttgcttggatgatattgcc
aaaggctcctttgtctgtatttatgcagggaagatcctgacagatgactttgctgacaag
gagggcctagaaatgggtgatgagtactttgccaatctggaccatattgagagcgtggag
aacttcaaggaggggtatgagagtgatgccccctgttcctctgacagcagtggtgtagac
ttgaaggaccaggaagatggcaacagcggtacagaggaccccgaggagtccaatgacgac
agctcagatgacaatttctgtaaggacgaggacttcagcaccagctcggtgtggcgcagc
tatgctacccgacggcagacccggggccagaaggagaatggattgtctgagatgtcttcc
aaggactctcgccccccagacctagggcccccacatattcctgtccctccatcaatccct
gtaggtggctgcaatccaccttcctctgaagagacatctaagaacaaagtggcctcgtgg
ttgagctccaatagtatcagtgaaggtggctttgctgactctgatagccgttcatccttc
aagactagtgaaggtggggaaggccgcactgggggaggcagaggggaagctgagaaggct
tccacctcagggctgggcttcaaggatgagggagacatcaagcaggccaagaaagaggac
cctgatgaccgaaacaggatgtcgatagttactgaaagctctcgaaattatggttataat
ccttctcctgtgaagcctgaaggacttcgccgcccaccaagtaagactagtatgcatcag
agccgacgactcgtggcctctgctcagccaaaccctgatgatatcctgaccctgtccagc
agcacagaaagtgagggggaaagtgggaccagccggaagccccctgctggccagacttca
gccacagccatggacagtgatgatatccagaccatctcctctggctctgaaggggatgac
tttgaggacaagaagaacatgtctggtccaatgaagcgccaggtggcagtaaaatccacc
cggggttttgctttgaaatcaacccatgggattgccattaaatccaccaacatggcatcc
gtggaaaagggggagagtgcacccgtccgtaagaacacacgccagttctacgatggggag
gagtcttgctacatcatcgatgccaagcttgaaggcaacctgggccgctacctcaatcac
agttgcagccccaacctgtttgtccagaatgtcttcgtggatactcatgatctccgcttc
ccgtgggtggccttctttgccagcaagagaatccgggctggcaccgagctcacctgggac
tacaactatgaggtgggcagcgtggagggcaaggagctgctttgctgctgcggggccatc
gaatgccgagggcgtcttctttag
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integrated database retrieval system
