Capricornis sumatraensis (Sumatran serow): 138078931
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Entry
138078931 CDS
T10522
Symbol
CD4
Name
(RefSeq) T-cell surface glycoprotein CD4
KO
K06454
T-cell surface glycoprotein CD4
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum03250
Viral life cycle - HIV-1
csum03260
Virion - Human immunodeficiency virus
csum04060
Cytokine-cytokine receptor interaction
csum04514
Cell adhesion molecule (CAM) interaction
csum04612
Antigen processing and presentation
csum04640
Hematopoietic cell lineage
csum04658
Th1 and Th2 cell differentiation
csum04659
Th17 cell differentiation
csum04660
T cell receptor signaling pathway
csum05135
Yersinia infection
csum05166
Human T-cell leukemia virus 1 infection
csum05170
Human immunodeficiency virus 1 infection
csum05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
csum05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
138078931 (CD4)
03260 Virion - Human immunodeficiency virus
138078931 (CD4)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
138078931 (CD4)
04514 Cell adhesion molecule (CAM) interaction
138078931 (CD4)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
138078931 (CD4)
04612 Antigen processing and presentation
138078931 (CD4)
04660 T cell receptor signaling pathway
138078931 (CD4)
04658 Th1 and Th2 cell differentiation
138078931 (CD4)
04659 Th17 cell differentiation
138078931 (CD4)
09160 Human Diseases
09161 Cancer: overview
05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
138078931 (CD4)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
138078931 (CD4)
05170 Human immunodeficiency virus 1 infection
138078931 (CD4)
09171 Infectious disease: bacterial
05135 Yersinia infection
138078931 (CD4)
09163 Immune disease
05340 Primary immunodeficiency
138078931 (CD4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
csum04090
]
138078931 (CD4)
CD molecules [BR:
csum04090
]
Proteins
138078931 (CD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CD4-extracel
C2-set
Tcell_CD4_C
Ig_3
ig
V-set
Ig_2
I-set
Ig_5
Receptor_2B4
Sp38
P_proprotein
V-set_CD47
DUF7601
Motif
Other DBs
NCBI-GeneID:
138078931
NCBI-ProteinID:
XP_068827803
LinkDB
All DBs
Position
4:complement(147665986..147681123)
Genome browser
AA seq
456 aa
AA seq
DB search
MGPGTSLRHLFLVLQLVMLPAGTQGKAVVLGKAGGQAELPCQASQKKNNMVFSWKDSSQS
KILGSHNSFLHKGNTELSHRVESKRNLWDQGSFPLIIKNLQVTDSGTYTCEVDSKKLEVE
LKVFGLTASSDTRVLLGQSLTLTLESPSGSNPSVQWKGPGNNRKGDLKSLSLAQVGLQDS
GTWTCTISQSQQTLDIKIPIVVLAFQKAPETVYVKEGEQAEFSFPLTFEDENLSGELTWQ
QANKDSSSQSWVTFTLRNREVKVNKTHKDLKLLVGERLPLRLTLLRTLPQYAGSGTLTLD
LTKGKLHQKVNLVVMRVTKSPNSLTCEVLGPSPPRLTLNLKLGNQSVKSSNQPKLVTEPE
PKAGMWQCLLSDQGKVLLESKIEVLPSEFIQAWPKLLPMVLGGIAGLVLFTGSCIFCVKC
WHRRRQAKRMSQIKRLLSEKKTCQCPHRLQKTYSLT
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgggcccggggacctctcttaggcacctgttcttggtgctgcaactggtgatgctcccg
gctggcactcagggaaaagcagtggtgctgggtaaggcaggaggccaggcagagctgccc
tgccaggcttcccagaagaagaacaacatggtcttcagctggaaagattcttcccagtcc
aagattctggggagtcataactccttcttgcacaaaggtaacactgaactgagccatcga
gtggaatccaaaagaaacctgtgggaccaaggatcctttcctctgatcatcaagaacctc
caagtaactgactcggggacttatacctgtgaagtggatagcaagaagctcgaggtggaa
ctgaaggtgttcggactgactgccagctcggacacccgcgtgctgctgggacagagcctg
accttgactttggagagtccctctgggagcaacccttctgtgcagtggaagggtccaggg
aataataggaagggagacctcaagagcctgtcactggcccaggtggggctgcaggacagt
ggtacctggacgtgcactatctcccagagccagcagacactggacatcaaaatacccatc
gtggtgctggccttccagaaggcccccgaaacagtctatgtgaaggagggggagcaggcg
gagttttccttcccactcacctttgaggatgaaaatctgagtggggagctgacttggcag
caggcgaacaaggattcttcttcccaatcctgggtcaccttcaccctgaggaacagagag
gtgaaggtgaacaagactcacaaggatctcaagctccttgtcggggagaggctaccgctg
cgtctcactctgctgcggactttgcctcagtacgcgggttctggaaccctgaccctggat
ctcaccaaggggaagttgcatcagaaagtgaacctcgtggtgatgagagtgactaagtcc
ccaaatagtctgacctgtgaggtgctggggcccagccccccaaggctgaccctgaacttg
aagctggggaaccagagtgtgaagagctcaaatcagccaaagttggtgacagagccggaa
cccaaggctgggatgtggcagtgtctgctgagtgaccagggcaaagtcctgctggaatcc
aagatcgaggtcttgccgtcagagttcatccaggcctggccgaagctcctgcccatggtg
ttggggggaatcgcaggcctagtgcttttcactggctcctgcatcttctgtgttaaatgc
tggcaccgcaggcgccaggcaaaacggatgtctcaaatcaagaggctcctcagtgagaag
aagacctgccagtgcccccaccggctccagaagacctacagtctcacctga
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