Capricornis sumatraensis (Sumatran serow): 138084784
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Entry
138084784 CDS
T10522
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138084784 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csum03041
]
138084784 (EFTUD2)
Spliceosome [BR:
csum03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
138084784 (EFTUD2)
Complex C
U5 SnRNP specific factors
138084784 (EFTUD2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
138084784
NCBI-ProteinID:
XP_068835284
LinkDB
All DBs
Position
8:complement(94698805..94737363)
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AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEVDEDEDDDDVGDHDEDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggatactgacttgtatgatgagtttgggaattacatcggaccagagcttgattctgat
gaagatgatgatgaattgggcagagagaccaaagatcttgatgaggtcgatgaggacgag
gacgacgacgatgtgggcgatcatgacgaagaccaccctgggatggaggtggtgctgcac
gaggacaagaagtactaccccaccgccgaggaggtgtacggccccgaggtggagaccatc
gttcaggaggaggacacccagcctctcacagaacccattattaagccagtgaaaaccaag
aaattcactctgatggagcagacattacctgtcacggtgtacgaaatggatttcttggca
gatctgatggataactcggagctcatcagaaatgtgactctctgtggccatctgcaccat
ggcaagacatgttttgtagattgtttaatagagcagactcacccggaaatcagaaagcgc
tatgaccaagatctgtgctacactgacatcctcttcacagaacaagagaggggtgttggc
atcaaaagtactcctgtgacagtggtcttgccagataccaaggggaaatcctacctcttc
aacatcatggacactccaggacacgtgaatttttctgatgaggtcacagcgggcttgcgc
atctcagatggagtggtccttttcatcgatgctgctgagggcgtgatgctgaacacagag
cggctgatcaagcacgcggtgcaggagaggctggcagtcaccgtgtgcatcaacaagatt
gaccggctgatcctggagctgaagctgccacccacggatgcttactataagctgcgtcac
attgtcgatgaggtcaacgggttaataagcatgtactccacggatgagaacctgatcctt
tccccgctcctgggcaacgtctgcttctccagctcccagtacagcatctgcttcacgctg
ggctcctttgccaagatctatgctgacaccttcggtgacattaactaccaggagtttgct
aaaagactctggggtgatatctacttcaaccctaagacgcggaagttcaccaaaaaggcc
ccaaccagcagctcccagaggagttttgtggagtttatcttggagcccctctataagatc
ctcgcccaggtcgtgggtgatgtggacaccagcctcccgaggaccctggatgagcttggc
atccacctgaccaaggaggagctgaagctgaacatccgccccctgctcaggctggtttgc
aaaaaattctttggcgagttcacaggctttgtggacatgtgtgtgcagcatatcccttct
ccaaaggtgggcgccaagcctaaaatcgagcacacctataccggtggtgtggactccgac
ctcggcgaggccatgagtgactgtgaccccgacggtcccctgatgtgccacacgaccaag
atgtacagcacagatgatggagttcagtttcatgcctttggccgagtgctaagtggcacc
atccatgctgggcagcctgtgaaggtactaggggagaactacaccctggaggatgaggaa
gactcccagatatgcaccgtgggccgcctttggatctctgtggccaggtaccacatcgaa
gtgaaccgtgttcctgctggcaactgggtccttatcgaaggtgtcgatcaaccaattgtg
aagacggcaaccataaccgaaccccgaggcaacgaggaggctcagatcttccggcccttg
aagttcaacaccacgtctgttatcaagattgccgtggagccagtcaatccctctgagctg
cccaagatgctggacggcctgcgcaaggtcaacaagagctacccgtccctcaccaccaag
gtggaagagtctggcgagcatgtgatcctgggcactggggagctctacctggactgcgtc
atgcacgatttgcggaagatgtactcggagatcgacatcaaggtggcggaccctgttgtc
acgttctgtgagacggtggtggaaacgtcatccctcaagtgttttgctgaaactcccaat
aagaagaacaagatcaccatgatcgccgagcctctggagaagggcctcgcagaggacata
gagaacgaggtggtccagatcacatggaacaggaagaagctgggagagttctttcagacc
aagtacgactgggatctgctggctgcccgttccatctgggctttcggcccggatgccacc
ggccccaacatcctggtggatgataccctgccctcggaggtggacaaggctcttctcggc
tcggtgaaggacagcatcgttcaaggtttccagtggggaaccagggaggggcccctctgt
gatgagttgattcggaatgtcaagtttaagatcctggatgcagtggttgcccaggagccc
ctgcaccggggcgggggccagatcatccccacagcccggagagtcgtctactcagccttc
ctcatggccacccctcgtctgatggagccctactacttcgtcgaggtccaggcccctgcg
gattgtgtctctgctgtctacacggtcctggccaggcgcaggggacacgtgactcaggac
gcacccatcccaggctctcctctctacaccatcaaagctttcatcccagccatcgactct
tttggctttgagactgatctgcgaactcacacgcagggccaggccttttccttgtctgtc
ttccaccactggcagattgtacctggtgaccctctggacaagagcattgtcatccgcccc
ttggagccacagccagctccccacctggcccgagaattcatgatcaaaacccgtcgtagg
aagggcctgagcgaggacgtgagcatcagcaagttcttcgatgatcctatgttgctggag
ctcgccaagcaggatgtggtgctcaactacccgatgtga
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