Capricornis sumatraensis (Sumatran serow): 138085262
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Entry
138085262 CDS
T10522
Symbol
RAPGEF6
Name
(RefSeq) rap guanine nucleotide exchange factor 6 isoform X1
KO
K08020
Rap guanine nucleotide exchange factor 6
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum04015
Rap1 signaling pathway
csum04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
138085262 (RAPGEF6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
138085262 (RAPGEF6)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
PDZ
RA
RasGEF_N
cNMP_binding
PDZ_6
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
138085262
NCBI-ProteinID:
XP_068835610
LinkDB
All DBs
Position
9:22837884..23046830
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AA seq
1600 aa
AA seq
DB search
MNSPVDPGARQALKKKPPERTPEDLNTIYSYLHGMEILSNLREHQLRLMSTRARYERYSG
NQVLFCSETIARCWYILLSGSVLMKDSMVLPPCSFGKQFGGKRGCDCLVLEPSEMIVVEN
SKDNEDSILQREIPARQSRRRFRKINCKGERQTITDDVDVNNYLSLPADLTKMHIADNPH
PQVTHVSSSQSGCSIASDSGSSSLSDIYQATESEVGDVDLTRLPEGPVDSEDEEEEDEDI
DRTDPLQGRDLVRECLEKEPADKTDDDIEQLLEFMHQLPAFANMTMSVRRELCSVMIFEV
VEQAGAVILEDGQELDSWYVILNGTVEISYPDGKVDNLFMGNSFGITPTLDKQYMHGVVR
TKVDDCQFVCIAQQDYWRILNHVEKNTHKVEEKGEIVMVHEHRELDRSGTRKGHIVIKGT
PERLIMHLIEEHSIVDPTYIEDFLLTYRTFLASPLDVGTKLLEWFKIDSLRDKVTRIVLL
WVNNHFNDFEGDPAMTRFLEEFEKNLEDTKMNGHLRLLNIACAAKAKWRQVVLQKASRES
PLHFSLSGGSEKGFGIFVESVEPSSKAADAGLKRGDQIMEVNGQNFENITFVKALEILRN
NTHLALTVKTNIFVFKELLSRTEQEKSGVPHIPKIAEKKSNRHSIQDVPGDLEQTSQEKG
NKKIKANTVSGGRNKIRKILDKTRFSILPPKLFSDGGLSQSQDDSIVGTRHCRHSLAIMP
IPGTLSSSSPDLLQPTTSMLDFSNPSDIPDQVIRVFKADQQSCYIIISKDTTAKEVVCQA
IHEFGLTGASDTYSLCEVSVTPEGVIKQRRLPDQFSKLADRIQLNGRYYLKNNMETETLC
SDEDAQELVKESQLSMLQLSTIEVATQLSMRDFDLFRNIEPTEYIDDLFKLESKTGNTHL
KEFEDIVNQETFWVASEILTESNQLKRMKIIKHFIKIALHCRECKNFNSMFAIISGLNLA
SVARLRGTWEKLPSKYEKHFQDLQDLFDPSRNMAKYRNILSNQSMQPPIIPLFPVVKKDM
TFLHEGNDSKVDGLVNFEKLRMIAKEIRQVVRMTSANMDPAMMFRQRSLSQGSTNSNMLD
VQGGGHKKRARRSSLLNAKKLYEDAQMARKVKQYLSSLDVETDEEKFQMMSLQWEPAYGT
LTKNLNEKKSMKSSEMSPVPLRSAGQTTKAHLHQPHRVSQVLQVPAVNLHPIRKKGQGKD
PATLSAGLPQKVLGTAEEVSGGKKHTEDTISVASSLHSSPPVSPQGSPRKGYTLIPSAKS
DNLSDSSHSEISSRSSIVSNCSVDSMSTALQDERYSSQAVAVPESTGALEKTEHSSGIGD
HSQLGPGWTLSKPSLINKSVAVSSSVSSEEISHEHIIIETADSGRGSWTSCSSSSHDNFQ
SLPNPKGWEFLNSYRPTHLDGPIAEVEPTDCEHYSCPKGCSRTCGQCKGSLETNQMRQSW
ASSSSLSDTYEPNYGTVKRRVLENTPAESSEGLDHKEGIDPVYKTVTSSTEKGLIVYCVT
SPKKEDRYREPPPTPPGYMGISLADLKEGPHLHLKPPEYSVAVQRSKMMHNSLSRLPPAS
LSSSPVACVPSKIVIQPQRHKPDVTDADSEADENEQVSAV
NT seq
4803 nt
NT seq
+upstream
nt +downstream
nt
atgaactcacctgtggaccctggcgctaggcaggcgctgaagaagaagccgccagagcgg
acgcccgaggacttaaatactatttattcttatcttcatggaatggaaatattatcaaat
ctcagggaacatcagcttcgattgatgtctacaagagcacgctatgagagatacagtggc
aatcaagttcttttttgttcagaaactattgccagatgttggtatatcctgctttctgga
tctgtgcttatgaaagactccatggttttgcctccttgcagttttggtaagcagtttgga
ggaaaaagaggatgtgattgtcttgtattagaaccttcagaaatgattgtggtagagaat
tccaaagataatgaagatagtattctacaaagagaaattcctgccagacagtctcgaaga
aggtttcggaaaattaattgtaaaggagaacgccagactattactgatgatgtggatgtt
aacaactatctttctcttccagccgatcttaccaagatgcacattgcagacaaccctcat
ccacaggtgactcatgtgtcttctagtcagtctggttgtagcatcgccagtgactctgga
agcagcagtttatctgatatctatcaggctaccgaaagtgaggtaggagatgtcgattta
acacgtcttccagaaggacctgttgattctgaagatgaagaagaggaagatgaagacatt
gatcgaacagatcctctgcaggggcgggatcttgtccgagaatgtcttgaaaaagaacct
gcagataaaactgatgatgacattgaacaattgctggagtttatgcaccagctccctgct
tttgcaaatatgactatgtctgtaaggagagaactctgctcagtgatgatttttgaagtg
gtagagcaggctggagctgttattcttgaagatgggcaagagcttgattcatggtatgtt
attttaaatggcactgtggaaatcagttatccagatggaaaagttgacaatctctttatg
ggaaatagttttggaatcacacccactctggataaacagtacatgcatggagttgttagg
actaaagtcgatgactgtcagtttgtctgcatagcccagcaggattattggagaatttta
aatcatgttgaaaaaaatacccataaagttgaggaaaagggagaaattgttatggtacat
gagcatcgtgaactggatcgaagtggaaccaggaaaggacacattgtaattaagggaaca
cctgagcgtctcatcatgcatttaatagaagaacattccattgtggacccaacttatata
gaagatttcctattaacttatagaacatttcttgcaagtcctttggatgttgggaccaaa
ctgttggaatggtttaaaattgacagcttaagggataaggtaacacggattgtattatta
tgggtaaataatcatttcaatgattttgaaggtgatcctgctatgactcgatttctagag
gaatttgaaaaaaatctggaagatacaaaaatgaatggtcatctccggttattgaatatt
gcgtgtgctgcaaaggctaaatggagacaggttgttctgcagaaagcttcccgggagtca
cctctgcatttcagcctaagtggagggagtgagaagggatttggtatttttgttgaaagt
gtggaacctagtagcaaagctgctgatgcaggactgaaacgtggtgatcaaataatggaa
gtaaatggacaaaattttgagaatataacgtttgtgaaggcccttgaaattttgaggaat
aatactcatcttgcacttactgtaaagacgaacatttttgtgttcaaagagttacttagt
aggactgaacaagagaaatctggtgttcctcatattcccaaaattgctgaaaaaaaaagt
aatcgccactcaatccaggatgtaccaggagatcttgaacagacatcacaggagaaagga
aataagaaaataaaagcaaatactgtttcaggtggaagaaacaaaatcaggaaaattttg
gataaaacacgatttagtatcttgcctccaaaactgtttagtgatggaggcctgagccag
tcacaggatgacagcattgtggggacgagacactgcaggcacagtctggccataatgcct
atccctggaacactctcgtccagcagccccgacctcctccagcctaccaccagcatgctg
gatttttctaatccctcagatattcctgatcaagttataagagttttcaaagcagatcag
caaagttgctacattatcatcagtaaagacactacagctaaagaagttgtttgtcaagct
attcatgaatttggtttgactggtgcatctgacacatactctctctgtgaagtttctgtt
actcctgagggtgttataaaacagagaagacttccagaccagttctccaaattagctgat
agaattcagctcaatggaaggtattatttgaaaaataatatggaaacagaaaccctatgt
tcagatgaagatgctcaagaactagttaaggaaagccagctatccatgctacaactaagt
actattgaggtggccactcagctgtcaatgagggactttgatttatttcgtaatattgag
cctactgaatatattgatgacctttttaagttagagtccaaaacaggaaatactcacttg
aaagaatttgaagacattgtaaaccaagagacattctgggttgcctcagaaattttaact
gaatcaaatcagcttaaacgaatgaagattattaaacattttattaaaattgcacttcat
tgtcgagaatgtaagaacttcaattccatgtttgcaataataagtggtttgaacttggca
tctgtagcacgactcagaggtacttgggaaaagttaccaagcaagtatgagaaacacttc
caagatctgcaagacctttttgatccatccagaaacatggcaaaatacagaaatattctt
agtaatcaaagcatgcagcctccaattattccactgtttcctgttgtcaagaaagatatg
acatttctacatgaaggaaatgattccaaagttgatggtttggtaaattttgagaaactc
agaatgattgccaaggaaattcgtcaggttgttcgaatgacttctgctaacatggaccca
gctatgatgttccgacagaggtcactgagtcaaggcagcacaaattcaaacatgctggat
gttcagggaggtggtcacaaaaagagggcacgccggagctctctgcttaatgccaagaag
ctttatgaagatgcccaaatggcaagaaaagtgaagcagtatctttccagtctggatgtg
gagacagatgaagagaagttccagatgatgtcattgcagtgggagcctgcatatggtacc
ttgaccaagaatttaaatgagaaaaaatcaatgaagtcatcagaaatgtctccggtgcca
ttgaggtcagctggccaaacaactaaagctcatttgcatcagccccacagagtaagccag
gtgcttcaggtgccagctgtaaatttgcaccctatcaggaagaagggccaaggaaaagac
cctgccacattgagtgcaggtttacctcagaaagttttaggaacagctgaagaagtaagt
ggtggtaagaaacacacagaagatactatttctgtggcatcatccttacattccagccct
cctgtgtctcctcagggttccccccgcaaaggttatacacttataccatcagctaaatct
gacaacttgtctgactccagccacagtgagatttcttcccggtccagcattgtgagcaac
tgttctgttgactccatgtctacagctctacaggatgaacggtattcctcccaggctgtg
gcagtccctgaatccactggagcattggaaaagacagagcactcctcagggataggagac
catagtcagcttggccctgggtggacactctcaaagccatctctaatcaacaagagtgta
gctgtctcatcttctgtgagcagtgaagagatttctcatgagcacatcattatagaaaca
gctgatagtggtcgtggaagttggacttcctgctcaagcagttcccatgacaacttccaa
agtcttccaaaccccaaaggctgggagtttttgaactcttaccgacctacccatttggat
ggtcccatagctgaagttgaacccactgactgtgagcactacagctgtcccaaaggctgt
tctcgaacttgtggtcagtgtaaaggaagcctagagactaatcagatgagacagagttgg
gcttcctctagttctctgtctgacacatatgaaccaaactatgggacagttaaacggaga
gtgctggagaacaccccagctgaatcatctgaaggcttggaccacaaagagggcatcgat
ccagtttataaaactgttacttcaagtacagaaaagggcttgattgtgtactgtgtcacc
tcacccaagaaggaagataggtatagggagccacctcccactcctccaggatacatgggg
atttctttagcggacctaaaggaaggaccccacctccacctaaaacctccagagtatagt
gtggcggtgcagaggtcaaagatgatgcataacagcctctctagactgccaccagcttct
ctcagtagcagccctgtggcctgtgttccatcgaagattgtaattcagcctcagaggcat
aaaccagatgtgactgatgcagatagtgaagcagatgaaaatgaacaagtttcagcagtg
tag
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integrated database retrieval system
