Chromobacterium subtsugae: U6115_07970
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Entry
U6115_07970 CDS
T11179
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
csut Chromobacterium subtsugae
Pathway
csut03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
U6115_07970 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csut03400
]
U6115_07970 (nth)
Enzymes [BR:
csut01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
U6115_07970 (nth)
DNA repair and recombination proteins [BR:
csut03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
U6115_07970 (nth)
Prokaryotic type
U6115_07970 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
WSE93170
LinkDB
All DBs
Position
complement(1617385..1618017)
Genome browser
AA seq
210 aa
AA seq
DB search
MNAAKRKEIFQRLRDANPHPATELEYSSPFELLISVLLSAQATDVGVNKATRRLYPVANT
PAAILALGEESLADFIKTIGLYKTKAKNVIATCRLLLEKHGGEVPQTREALEALPGVGRK
TANVVLNTAFGHPTIAVDTHIFRVANRTRLAPGKDVREVEDKLEKFVPAEFKVDAHHWLI
LHGRYVCKARKPECERCIIADLCEYPAKPL
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgccgccaaacgcaaagagattttccagcgcctgcgcgacgccaatccgcacccg
gccaccgaactggaatacagctcgccgttcgaactgctgatttcggtgctgctgtcagcc
caggccaccgatgtcggcgtcaacaaggcgacgcgccggctgtatccggtagccaacacc
ccggcggcgatactggcgctgggcgaggaaagcctggccgacttcatcaagaccataggc
ctatacaagaccaaggccaagaacgtgatcgccacctgccggctgttgctggaaaagcat
ggcggcgaagtgccgcaaacgcgcgaagcgctggaggcgctgcccggcgtcggccgcaaa
accgccaacgtggtgctcaacaccgccttcggccatcccaccatcgcggtggacacccat
atcttccgcgtcgccaaccgcacccggctggcgccgggcaaggatgtgcgcgaggtggag
gacaagctggaaaagttcgtgcccgccgaattcaaggtggacgcccaccattggctgatc
ctgcacggccgctacgtctgcaaggcgcgcaagccggaatgcgaacgctgcatcatcgcc
gacctctgcgaatatccggcaaaaccgttatga
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