Cucumis sativus (cucumber): 101204255
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Entry
101204255 CDS
T02486
Name
(RefSeq) transcription factor PIF1
KO
K16189
phytochrome-interacting factor
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
101204255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csv03000
]
101204255
Transcription factors [BR:
csv03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
101204255
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
101204255
NCBI-ProteinID:
XP_011651631
UniProt:
A0A0A0LE09
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Position
3:25161505..25169485
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AA seq
539 aa
AA seq
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MNYCVPDFETDEDSLLPSSSSVPSRSKTSSMLDGEVMELLCQNGQVVMQSPNQKSRMKSP
QSTTAEQITNRDTRPMSQQEEPQLFMQEDEMISWLHYPLVDDSTLENSFRDELLYPSNPQ
SIEQNAVVSAQVRTTDGMEFRPLTAMTTTATSTMVARPPIPPMRRTEPETKVNSFGRFSG
HARRIESAPSNSKNMVRESTVVGSTSSNTMVLTPETRSSEVQRTAITDIPSCGLACSGGV
AAPSTGNGGELMKMIVSETEPVQRTTSLEDRKRKGKETDDSDYLCYSTDVEFESTDAKKQ
VRGSTSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKADKASMLDEAIEYLKTL
QLQVQMMSMGCGMVPMMFPGAQQFMPPMGMGMGLGMGIGIGMEAGVNRPMMPYPNMLAGQ
MFPWQAGATQLGPSLSFPPFHMAHVSNTDPSRIQETNQSDQMHSSSEMQNINLPRASSSL
DSYHQFPGSQQMQKSASSSQPSLQNQPPALLPGTHNQHTRRRLENIDNHETGSPTMYPC
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgaattactgcgtccctgattttgagaccgacgaagattccttgcttccttcttcttct
tccgtgccatcgcgctccaagacgtcttccatgttagatggtgaggttatggaacttcta
tgtcagaacggtcaagtggtaatgcaaagtccaaaccagaaatccaggatgaaatcgccg
cagtctaccaccgcggagcaaatcacgaacagagacactcgccctatgagtcaacaggag
gaaccgcagctcttcatgcaggaggacgaaatgatttcgtggcttcattatcctctggtt
gatgattctactttggagaatagtttccgtgatgaacttctttatccttctaatcctcag
agtattgagcaaaacgccgtcgtttctgcacaagttcgtactactgatggcatggagttt
cggcctctcacagcgatgacgacgacagcgacctcaacaatggttgctcggccgccaatt
ccaccgatgagaagaacggaaccggaaacgaaggtaaatagtttcgggcgcttctccggg
cacgcacggaggatcgaatctgctccgtccaattcgaagaacatggtaagggaatctaca
gtggtcggttcgacttcaagcaacacaatggtgttgacgccggaaacaaggagttcggaa
gtacagagaacggctataaccgatataccaagctgtggtttagcctgcagtggtggagta
gcagctccgtcgactggcaacggtggagaactgatgaagatgatagtaagtgaaacagaa
ccggttcaaaggacaacgagtcttgaggatcggaagcggaaaggaaaagaaacggacgat
tccgattacctatgctatagcacggatgttgaattcgaatctactgatgcaaagaagcaa
gttcgtggatcgacctctacaaagagatctcgtgctgctgaggtccataatctctcagag
cgaagaagaagagatcggataaatgaaaagatgaaagctttgcaggagcttataccccgg
tgtaacaaggcagacaaagcttcaatgttggacgaggcaattgaatacttgaagacactt
cagttacaagttcagatgatgtccatgggatgtggtatggtgccaatgatgtttcctggt
gctcaacaatttatgcctccgatgggaatgggaatgggacttggaatgggcatcggtatc
ggcatggaagcaggtgtaaaccgtcccatgatgccatatcctaacatgttagctggacag
atgtttccgtggcaagctggagccactcaacttggaccttctctctcttttccacccttt
catatggctcatgtttccaatactgatccatcaagaatccaagaaaccaatcagtcagat
caaatgcacagctcatcagaaatgcaaaatataaatctgccaagggcctcgagttcactt
gatagctatcatcagtttcctggttcccaacagatgcaaaagtcagcatcatcatcacag
ccttccctacagaatcaaccgccagccctgctaccaggaacacataatcaacatactagg
cggagacttgaaaatatcgacaatcatgaaacaggaagtcctaccatgtatccgtgttga
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