KEGG   Cucumis sativus (cucumber): 101212096
Entry
101212096         CDS       T02486                                 
Symbol
ABCA19
Name
(RefSeq) ABC transporter I family member 19-like
  KO
K12608  CCR4-NOT complex subunit CAF16
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    101212096 (ABCA19)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csv03019]
    101212096 (ABCA19)
Messenger RNA biogenesis [BR:csv03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     101212096 (ABCA19)
SSDB
Motif
Pfam: ABC_tran AAA_21 nSTAND3 ORC-CDC6-like AAA_29 AAA_23 AAA_28 SMC_N AAA NACHT AAA_5 AAA_15 AAA_18 AAA_30 Rad17 AAA_33 AAA_16 SRP54 AAA_24 PduV-EutP AAA_22 AAA_25 Arf AAA_7 ATP-synt_ab Zeta_toxin AAA_14
Other DBs
NCBI-GeneID: 101212096
NCBI-ProteinID: NP_001267701
UniProt: L7Y071
LinkDB
Position
7:complement(16319689..16323656)
AA seq 306 aa
MADNGISIAGNDGIEVLDEKGSTSIKVQAMQFSYESDSPLFVEFNLQVGSGSRCLLVGAN
GSGKTTLLKILAGKHMVGGRDVVQVLNGSAFHDTQLVCSGDLAYLGGSWSRTISCAGEVA
LQGDFSAEHMIFGVEGTDPERRDRLIDLLDIDLRWRMHKVSDGQRRRVQICMGLLHPFKV
LLLDEVTVDLDVVARMDLLDFLKEECDQRGATIVYATHIFDGLETWATHLAYIQDGELRK
SEKLSKVEELKTCANLLSVVETWLRAETKLEKKKKLPIQPPSNNQKIVSPFGSSPFMSSR
HMAYYR
NT seq 921 nt   +upstreamnt  +downstreamnt
atggcggacaacggaatttctatcgccgggaatgatggtattgaagttttagatgagaag
ggttccaccagcatcaaggtacaagcgatgcaattctcttatgaaagtgattcacctctt
tttgtcgagtttaatctccaggttggctctggatctcgatgtcttcttgttggcgccaac
ggatctgggaagacgactttgctgaaaattttggccggaaaacatatggttggaggaaga
gatgttgtccaggttctaaatggttcagcttttcatgatactcaactcgtctgtagtggt
gacttggcctacttgggaggatcttggagtagaaccattagctgtgcgggagaggttgca
ttacagggagatttttctgccgagcatatgatatttggagttgaagggacggatcctgaa
aggagagataggttaattgacctccttgatatagatcttcggtggcgaatgcataaggta
tctgatgggcaacgtcgtagggtgcaaatctgcatgggcctgttacatcctttcaaggtt
ctcttattggatgaggtcacagttgaccttgatgtcgttgcaaggatggaccttctggat
ttcttgaaggaagagtgtgatcagaggggagctacaattgtatatgcaactcacatattt
gatggactggagacatgggcaactcatctagcatacattcaagatggtgagctaagaaag
tcagagaagttatccaaagttgaagagttgaaaacttgtgcaaatttgctatctgtggtt
gagacttggctgcgcgctgaaaccaaacttgagaagaagaagaagctaccaattcaacct
ccatccaacaatcagaagattgtttctcctttcggttcgtctcctttcatgtcttccaga
catatggcttattatcgttag

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