Cucumis sativus (cucumber): 101217865
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Entry
101217865 CDS
T02486
Name
(RefSeq) DNA repair protein RAD16 isoform X1
KO
K15083
DNA repair protein RAD16
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csv03400
]
101217865
DNA repair and recombination proteins [BR:
csv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
101217865
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-RING_UBOX
zf-C3HC4
zf-RING_5
ResIII
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
DEAD
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
101217865
NCBI-ProteinID:
XP_004151894
UniProt:
A0A0A0LN53
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Position
2:complement(23224647..23232498)
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AA seq
875 aa
AA seq
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MKLRPRKPASNVLIEEGNVDGDFSDDIDVSSLVSDCGSEDLSSSSEDFSEHSTKKSRART
QKKRIKKDGPSIEQEVGSNVGNDENLNNPRPEIADSQGVVDIEKPKTKYSRKKKTKPTLL
WNIWEEEYERWIDENIEKDFDLANQNEVFAEAVETPAALTMPLLRYQKEWLAWALKQEDS
SIKGGILADEMGMGKTIQAIALVLAKRQLSGTAGLRRPSSNPSSSKDLPLIKATLVICPV
VAVSQWVSEIDRFTSEGSYKVLVYHGPKRERSLEVLSEYDFVITTYSVVEADYRKYLMPP
KDRCPYCSKLFHKKNLKFHLMYICGPDAVKTEKQSKQQRKRPIQPQICKQEKSDKDKNNN
VHKSGGQKSTLGQTVEEHENDEKHRGNSILHSVIWDRVILDEAHFIKDRLSNTAKAVLAI
SSSFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSLTCPNCPHKRV
RHFCWWNKNISQRIQNFGRGPEFKRGMILLKHKILSTIVLRRTKKGRAADLALPPSTVSI
RRDTLDIQEEDFYESLYNDSRAKFNTFVAAGTVTSNYAHIFDLLIRLRQAVNHPYLVVYS
KTNAINSGNIDDSDSNNKQVCGICYEPAEEPVDTSCKHTFCKACLIDYAGDFSKPVSCPS
CSKMLTSDFITSMAFKDQTVKNKIKGFKSSSILNRIQLENFQTSTKIEALREEIRFMFER
DGSAKGIVFSQFTSFLDLINYSLSKSGITCVQLVGSMSLTQRADAINRFIEDPDCKIFLM
SLKAGGVALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRIMRFFIENSIEERI
LKLQERKELVFEGTVGRSNEALGRLTLDDMRYLFL
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttcgtccccgtaagcccgcctccaatgtattgatcgaagaaggaaacgtagac
ggagatttctctgatgatatagacgtgtcatctcttgtttccgactgtggaagtgaagat
ctttcctcgagttctgaggacttcagcgagcattcaacaaagaagtctagagcaaggaca
cagaaaaaacgtattaaaaaggatgggcccagcattgagcaggaagtgggaagcaatgta
ggcaatgatgaaaacctaaacaatccgagaccagaaattgctgactcccagggtgtggtt
gatatagagaagccaaagaccaagtactcaaggaaaaagaagacaaagcctacccttttg
tggaatatctgggaggaagaatatgagagatggattgatgaaaacattgaaaaagatttt
gatttggctaatcagaatgaagtatttgctgaagctgttgaaacacccgctgcacttacg
atgcccctgctacggtaccagaaagagtggctagcttgggcactgaagcaggaagattct
tcaattaaaggtgggatacttgcagatgaaatgggaatgggaaaaaccatccaagctatt
gcgctggtacttgctaaacgtcagctatctggtactgctggattgagaagaccctcatcg
aatccaagttcttccaaggacttgcctttgatcaaagcaactcttgtgatatgtcctgtg
gttgctgtgagccagtgggtaagtgagattgatcgtttcacatcagagggaagttacaag
gtgcttgtgtatcatggtccaaaacgagaacggagtcttgaggttttatcagaatatgat
tttgttattaccacatactctgttgtcgaggctgattacaggaaatatctgatgcccccc
aaggataggtgcccttactgtagtaaactatttcataagaagaatttgaagtttcacttg
atgtacatctgtgggcctgatgctgttaaaacagagaagcagtcgaagcaacaaaggaaa
aggcctatacagccacaaatatgtaaacaggagaaatctgataaagataagaacaataat
gttcacaaaagtggtggccagaaaagcactcttggacagacagtggaggagcatgagaat
gatgaaaaacatcgtgggaattcaatattgcattctgtgatatgggaccgtgtcattttg
gatgaggcacatttcataaaagataggctgtctaatactgcaaaagctgttcttgcaatt
tcttcttcatttagatgggctttaagtggcacacctatccagaatcgcgttggggagctt
tactcgcttgttcgcttcctgcaaattgtcccctattctttctacttctgtaaggactgt
gattgtagaacactcgatcatagttcccttacctgtcctaactgccctcataaacgtgtg
cggcatttttgctggtggaacaagaatatttctcaacggattcaaaattttgggagaggt
ccagagtttaaaagagggatgatattgctgaagcataagattttaagtaccattgtgctt
cgacgcaccaaaaagggtagagctgctgatctggctcttcctccaagtactgtttcaatt
aggcgagatacccttgacattcaagaagaagatttttatgaatcattgtataatgatagt
cgagcaaaatttaatacttttgttgcagctggaacggtaacaagtaattatgcacacata
tttgacctattgattcgcttgagacaggcggttaatcatccatatcttgtggtgtattct
aaaactaatgccataaatagtggaaacattgatgattctgatagtaataacaagcaagta
tgtggaatttgttatgagccagcagaagaacctgtggatacctcttgcaagcacacattt
tgtaaggcctgcttaattgattatgccggtgatttttcgaagcctgtctcatgtccttct
tgctcaaagatgctcaccagtgacttcatcacaagtatggcttttaaagatcaaaccgtt
aaaaataaaattaaggggtttaaatcttcaagtattcttaacagaatacagctggagaac
tttcagacgagcacaaaaatagaagctttgagagaagaaattagattcatgtttgaaaga
gatggttctgccaaaggaatcgtttttagccaattcacttcatttttggatctcataaac
tattccttgtctaagtctggtattacctgcgttcaattagttggaagcatgtcgttgact
caaagagccgatgctattaatagattcattgaagatccagattgcaagatttttctaatg
agcttgaaagcaggaggggttgccctcaatcttactgtggcatcgcatgtcttcattatg
gacccttggtggaatcctgctgtggaaaggcaagcacaagatagaatccatcgaattggg
cagtataaacctatcagaattatgagattttttattgaaaactccatcgaggagaggatt
ttgaagctacaagagaggaaagaactggtatttgaaggaactgtaggtcgctcaaatgag
gccttgggaagattaaccttggatgacatgagatacctgtttctttga
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