Carlito syrichta (Philippine tarsier): 103258860
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Entry
103258860 CDS
T07836
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component isoform X1
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
csyr
Carlito syrichta (Philippine tarsier)
Pathway
csyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103258860 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csyr03041
]
103258860 (EFTUD2)
Spliceosome [BR:
csyr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
103258860 (EFTUD2)
Complex C
U5 SnRNP specific factors
103258860 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
103258860
NCBI-ProteinID:
XP_008054728
Ensembl:
ENSTSYG00000013172
UniProt:
A0A1U7TE97
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEMDDDDDEDDIGDHDDDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLMEQTLPATVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLVL
SPLLGNVSFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggataccgacttatatgatgagtttgggaattacatcggaccagagcttgattctgac
gaagatgatgatgaattgggcagagagaccaaagatcttgatgagatggatgatgatgac
gacgaagatgacataggcgatcatgacgacgatcaccctgggatggaggtggtgctgcat
gaggacaagaagtactacccgacagccgaggaagtctacggcccagaggtggagaccatc
gtccaggaggaagacacccaacctctcacagagcccattattaagccagtgaaaaccaag
aaattcactctgatggagcagacgttgcctgccacagtgtatgaaatggatttcctggca
gatctgatggataactcagagctcatcagaaatgtgaccttgtgtggccatctccatcat
ggcaagacgtgttttgtagattgtttaatcgagcagacccacccggaaatcagaaagcgc
tatgaccaagatctgtgttatactgacatcctcttcacagagcaagagagaggtgttggc
atcaaaagcactcctgtgaccgtggtcttgccagataccaaagggaagtcttacctcttc
aatatcatggacactccagggcatgtgaacttttccgacgaggtcacagctggcttacgc
atctcagatggagtggtcctgttcatcgatgctgcagagggggtcatgctgaacacagag
cggctgatcaagcacgcggtgcaggagaggctggcagtcaccgtgtgcatcaataagatc
gaccgactcatcctggaactgaagctgccgccaaccgacgcctactacaagctacgccac
attgtggatgaggtcaatggattgataagcatgtattccactgacgagaacctggtcctc
tccccgctcctgggcaacgtcagcttctccagctctcaatacagcatctgtttcacgctg
ggctctttcgccaagatttatgccgacacctttggtgacattaactaccaggagtttgct
aagagactctggggtgacatctacttcaacccgaagacgcgtaagttcaccaaaaaggcc
ccaaccagcagctcccagaggagctttgtggagttcatcctggaacccctgtataagatc
ctcgctcaggttgtgggtgatgtggacaccagcctcccacggaccctggacgagcttggc
atccacctgaccaaggaggaactgaagctgaacatccgccccctgctcaggctggtctgc
aagaagttctttggcgagttcactggctttgtggacatgtgtgtgcagcatattccttcc
cccaaggtgggcgccaagcccaaaattgagcacacgtacactggcggtgtggactccgac
ctcggcgaggccatgagcgactgtgaccctgatggtcccctgatgtgccacactactaag
atgtacagcacggacgatggagtccagtttcatgcctttggccgggtgctgagtggcacc
atccacgccgggcagcctgtgaaggtgctgggggagaactacaccctggaggacgaggag
gactcccaaatctgcaccgtgggccgcctctggatctctgtggccaggtaccacatcgag
gtgaaccgtgttcctgctggcaactgggttctgattgaaggtgtggaccagcccattgtg
aagacggcgaccataactgaaccccgaggcaatgaggaggctcagatcttccggcccttg
aagttcaataccacctctgtcatcaagattgccgtggagcctgtcaacccctcagagctg
cccaagatgctggatggcctgcgcaaggtcaacaagagctacccgtccctcaccaccaag
gtggaagagtctggcgagcatgtgatcctgggcaccggggagttgtacctggactgcgtg
atgcacgatttgcggaagatgtactcagagatagacatcaaggtggctgacccagttgtc
acattttgtgagacggtggtagagacgtcctccctcaagtgctttgcagaaactcccaat
aagaagaacaagatcaccatgatagctgagcctcttgagaagggcctcgccgaggacata
gagaacgaggtggtccagatcacgtggaacaggaagaagctgggagagttcttccagacc
aagtatgactgggatctgctggctgcacgttccatctgggcttttggtcctgatgccacc
ggccccaatatcctggtggatgacactctgccctctgaggtggacaaggctctcctgggc
tcagtaaaggacagcattgttcaaggcttccagtggggaaccagggaggggcccctctgc
gatgagttgattcggaacgtcaagttcaagatcctggatgcagtggttgcccaggagccc
ctgcaccggggtgggggccagatcattcccactgctaggagggtcgtctactctgccttc
ctcatggccacccctcgtctgatggagccctactacttcgtggaggtccaggccccggcg
gactgtgtctctgcggtttacactgtcctggctaggcgtaggggccacgtgactcaggat
gcacctatcccgggctcccctctctacaccatcaaagcttttatcccagccatcgactct
ttcggctttgagacagacctccggactcacacccagggacaggccttttccctgtctgtc
ttccaccactggcagattgtacctggtgatccactagacaagagcattgtcatccgtccc
ttggagccacaaccagctcctcacctggcccgggagttcatgatcaaaactcggcgcagg
aagggcctcagtgaagacgtgagcatcagcaagttcttcgacgaccctatgctgctggag
ctcgccaagcaggacgtggtgctcaactaccccatgtga
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