Carlito syrichta (Philippine tarsier): 103263504
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Entry
103263504 CDS
T07836
Symbol
DDX58
Name
(RefSeq) probable ATP-dependent RNA helicase DDX58
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
csyr
Carlito syrichta (Philippine tarsier)
Pathway
csyr04064
NF-kappa B signaling pathway
csyr04622
RIG-I-like receptor signaling pathway
csyr04623
Cytosolic DNA-sensing pathway
csyr05160
Hepatitis C
csyr05161
Hepatitis B
csyr05162
Measles
csyr05164
Influenza A
csyr05168
Herpes simplex virus 1 infection
csyr05169
Epstein-Barr virus infection
csyr05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
csyr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
103263504 (DDX58)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
103263504 (DDX58)
04623 Cytosolic DNA-sensing pathway
103263504 (DDX58)
09160 Human Diseases
09172 Infectious disease: viral
05161 Hepatitis B
103263504 (DDX58)
05160 Hepatitis C
103263504 (DDX58)
05171 Coronavirus disease - COVID-19
103263504 (DDX58)
05164 Influenza A
103263504 (DDX58)
05162 Measles
103263504 (DDX58)
05168 Herpes simplex virus 1 infection
103263504 (DDX58)
05169 Epstein-Barr virus infection
103263504 (DDX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
csyr04054
]
103263504 (DDX58)
Enzymes [BR:
csyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103263504 (DDX58)
Pattern recognition receptors [BR:
csyr04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
103263504 (DDX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARD_2
RIG-I_C
RIG-I_C-RD
DEAD
Helicase_C
ResIII
AAA_25
Motif
Other DBs
NCBI-GeneID:
103263504
NCBI-ProteinID:
XP_008059372
Ensembl:
ENSTSYG00000004200
UniProt:
A0A1U7U242
LinkDB
All DBs
Position
Unknown
AA seq
926 aa
AA seq
DB search
MTTEQRRNLQAFGDYVRKILDPTYILSYMTSWFREDEVQCIQAERNNKGPTEAATLFLKY
LLELQEEGWFRGFLDALAHAGYSGLYEAIESWDFQKIEKLEEYRLLLKRLQPEFKTRINP
EDILPEISECLIKQECEEIVQVCSNKGTMAGAEKMVECLLRSDKENWPKTLTFALEKEES
RFSELWIVGKDIKDAEMKDLEDERLETSEVQIFYQEDPEYQNLSQNSCLPSEESHTSWHS
PFKPRNYQLELALPAKEGKNTIICAPTGCGKTFVSLLICEHHFNNFPQGQKGKVVFFANQ
IPVYEQQKSVFSKYFERLGYKVTGISGATTENIPVKQMVENNDIIILTPQILVNNLKNGT
IPSLSIFTLMIFDECHNTSKQHPYNMIMFHYLDQKLGGSSGPLPQVIGLTASVGVGDAKN
TEEAIDYICKLCASLDASVIATVKDNLEELEQVVHKPQKFFRKVESRTTDKFKCIMSQLM
RAIENLAKSIYEDIESLSQIKNREFGTQKYEQWIVTIQKECSVFKMPDKDEESRICKALF
LYTSHLRKYNDALIINEHARMKDALDYLKHFFSNVRAAGFNEIEQDLTRRFEEKLQELES
ISRDPSNENPKLEDLCFVLQEEYHFNQETKTILFVKTRALVDALKKWIEENSNLSFLKPG
ILTGHGKTNQNIRMTLPAQKCILDSFRASGDNNILIATSVADEGIDIAQCNLVILYEYVG
NVIKMIQTRGRGRAKGSKCFLLTSNNDVIEKEKINICKEKMMNDSILNLQKWDEAVFKEK
ILYIQNQEKLLRDSQEKAKPIPDKENKKLLCRKCKTLACFTADIRVVEESHYTVLGGAFK
ECFVTKPHPRPKTYMNFEKRAKIFCARQDCCHDWGIFVKYKTFEIPVIKIESFVVEDVAT
GIQMLYPKWKNFHFEKIPFDAAEMSK
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgagcagcggcggaacctgcaagccttcggcgactatgtcaggaagatcctg
gatcccacctacatcctgagctacatgacctcctggtttagggaggatgaagtgcagtgt
attcaggctgaaagaaacaacaagggacccacggaggctgccacactttttctcaaatac
ctgttggagctccaggaggaaggctggttccgtggatttttggatgccctagcccacgca
ggttattctggactttatgaagccatagaaagttgggatttccaaaaaattgaaaagttg
gaggagtatagattacttttaaagcgtttgcaaccagaatttaaaaccagaattaatcca
gaagatatccttcctgaaatatctgaatgtttaattaagcaggaatgtgaagaaattgta
caggtttgctccaataaagggacaatggcaggtgcagagaaaatggtggaatgccttctc
agatcagacaaggagaactggcccaaaactttgacatttgctttggagaaagaagaaagc
aggttcagtgaactgtggattgtgggaaaagatataaaagatgctgaaatgaaagacctt
gaagatgaaaggttggaaacctctgaagtacaaattttctaccaggaagatccagaatac
cagaatctcagtcaaaattcatgtctgccttcagaagaatctcatactagctggcacagc
ccatttaagccaagaaattatcaactagagcttgctttgcctgctaaggaaggaaaaaac
acaataatatgtgctcctactggttgtggaaaaacctttgtttcacttcttatatgtgaa
catcacttcaacaattttccacaagggcaaaagggaaaagttgtcttttttgctaatcag
attccagtatatgagcagcagaaatctgtgttctcaaaatattttgaaagacttgggtac
aaagttacaggcatttctggagcaacaactgagaatatcccagtgaaacagatggtagag
aacaatgacatcatcattttaactccacagattcttgtaaacaaccttaaaaatggaaca
attccatcactgtctatctttactttgatgatatttgatgagtgccataacaccagtaaa
caacatccatataatatgatcatgtttcattatctagatcagaaacttggaggatcttca
ggcccgctgcctcaggtcattgggctgactgcctccgtgggtgttggagatgccaaaaac
acagaggaagccatagattatatctgcaaactgtgtgcttctcttgatgcatcagtgata
gcaacagtcaaagacaatttggaggaactggagcaagttgttcataagccccagaagttt
ttcaggaaagtggaatcacggactactgacaaatttaaatgcatcatgtctcagctgatg
agggctatagaaaatctggcaaagagcatctatgaagacattgaaagcctgtctcaaatt
aaaaatagggaatttggaacacagaaatatgaacaatggattgtcacaattcagaaagaa
tgctcagtgttcaagatgccagacaaagatgaagaaagcaggatttgtaaagcgctgttt
ttgtacacttcccatttgcggaaatataatgatgccctcattatcaatgaacacgcacga
atgaaagatgctctggattacttgaaacacttctttagcaatgtccgagcagcaggattc
aatgagattgagcaagatcttactcggagatttgaagaaaagctgcaggaactagaaagt
atttccagggatcccagcaatgagaaccctaaacttgaagacctctgcttcgtcttacaa
gaagagtatcacttcaaccaagagacaaaaacgattctctttgtgaaaaccagagcactt
gtggatgctttaaagaaatggattgaagaaaattctaatctcagctttctaaagcctggc
atattgaccggacatggcaaaacgaatcagaacataagaatgactctcccagcacagaag
tgtatactggattcattcagagccagtggagataacaatattctgattgccacctcagtt
gctgatgaaggaatcgacattgctcagtgcaatcttgtcatcctgtatgagtatgtggga
aatgtcatcaaaatgatccaaacaagaggcagaggaagagcaaaaggtagcaagtgtttc
cttctgactagtaataatgatgtcattgagaaagaaaaaataaacatatgcaaagaaaaa
atgatgaatgactccattttaaaccttcagaaatgggatgaagctgtatttaaagaaaag
attctctatatacagaatcaggaaaaactcctcagagatagccaagaaaaagcaaaacct
atacctgataaggaaaataaaaaactactctgcaggaagtgcaaaaccttggcgtgtttt
acagctgatataagagtggtagaggaaagccattacactgtgcttggaggtgcttttaag
gaatgctttgtgactaaaccacaccccagaccaaagacatatatgaattttgagaaaaga
gcaaagatattctgtgccagacaggattgttgccatgactggggaatctttgtgaagtat
aagacatttgagattccagttataaaaattgaaagttttgtagtggaagatgttgcaact
ggaattcagatgctgtacccaaagtggaagaattttcattttgaaaagataccatttgat
gctgcagaaatgtccaaatga
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