Carlito syrichta (Philippine tarsier): 103264052
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Entry
103264052 CDS
T07836
Symbol
KDM2B
Name
(RefSeq) lysine-specific demethylase 2B isoform X3
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
csyr
Carlito syrichta (Philippine tarsier)
Pathway
csyr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
csyr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
103264052 (KDM2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csyr03000
]
103264052 (KDM2B)
04121 Ubiquitin system [BR:
csyr04121
]
103264052 (KDM2B)
03036 Chromosome and associated proteins [BR:
csyr03036
]
103264052 (KDM2B)
Enzymes [BR:
csyr01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
103264052 (KDM2B)
Transcription factors [BR:
csyr03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
103264052 (KDM2B)
Ubiquitin system [BR:
csyr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
103264052 (KDM2B)
Chromosome and associated proteins [BR:
csyr03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
103264052 (KDM2B)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
103264052 (KDM2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
F-box
JHD
Cupin_8
DUF7885
JmjC
AppA_SCHIC
Motif
Other DBs
NCBI-GeneID:
103264052
NCBI-ProteinID:
XP_008059896
Ensembl:
ENSTSYG00000012800
UniProt:
A0A1U7U1W4
LinkDB
All DBs
Position
Unknown
AA seq
1248 aa
AA seq
DB search
MEGKDFNYEYVQREALRVPLVFREKDGLGIKMPDPDFTVRDVKLLVGSRRLVDVMDVNTQ
KGTEMSMSQFVRYYETPEAQRDKLYNVISLEFSHTKLEHLVKRPTVVDLVDWVDNMWPQH
LKEKQTEATNAIAEMKYPKVKKYCLMSVKGCFTDFHIDFGGTSVWYHVFRGGKIFWLIPP
TLHNLALYEEWVLSGKQSDIFLGDRVERCQRIELKQGYTFFIPSGWIHAVYTPVDSLVFG
GNILHSFNVPMQLRIYEIEDRTRVQPKFRYPFYYEMCWYVLERYVYCVTQRSYLTQEYQR
ESMLIDACRKPSIDGFSSDSWLEMEEESCEQQLQEEEEKEEEEGEGVDKAPKPPTDGPAS
PTSTPSEDQEAPGKKSKAPAMRFLKRTLSNESEESVKSTTMPVDYPKTPTGSPATEVATK
WTHLTEFELKGLKALVEKLESLPENKKCVPEGIEDPQALLEGVKNVLKEHADDDPSLAIT
GVPVVTWPKKTPKNRAVGRPKGKLGPASAVKLAANRTTAGARRRRTRCRKCEACLRTECG
ECHFCKDMKKFGGPGRMKQSCIMRQCIAPVLPHTAVCLVCGEAGKEDTVEEEEGKFNLML
MECSICNEIIHPGCLKIKESEGVVNDELPNCWECPKCNHAGKTGKQKRGPGFKYASNLPG
SLLKEQKMNRDNKDGQEPAKRRSECEEVPRRRSDEHPKKAPADGILRRKSDDVHLRRKRK
YEKPQELSGRKRASTLQTSPGSSSHLSPRPPLGSSLSPWWRSSLTYFQQQLKPGKEDKLF
RKKRRSWKNTEDRMALANKPLRRFKQEPEDDLPEAPPKTRESDHSRSSSPTAGPSTEGAE
GPEEKKKVKMRRKRRLPNKELSKELNHEIQKTESSLADENHQPIKSEPESENEEPKRPLG
LCERPHRFSKGLNGTSREQLRHQLGPGLRSPPRVISRPPPSVSPPKCIQMERHVIRPPPI
SPPPDSLPLDDGAAHVMHREVWMAVFSYLSHQDLCVCMRVCRTWNRWCCDKRLWTRINLN
HCKSITPLMLSGIIRRQPVSLDLSWTNISKKQLSWLINRLPGLRDLVLSGCSWIAVSALC
SSSCPLLRTLDVQWVEGLKDAQMRDLLSPPTDNRPGQMDNRSKLRNIVELRLAGLDITDT
SLRLIIRHMPLLSKLHLSYCNHVTDQSINLLTAVGTTTRDSLTEINLSDCNKVTDQCLSF
FKRCGNICHIDLRYCKQVTKEGCEQFIAEMSVSVQFGQVEEKLLQKLS
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atggagggcaaagatttcaactatgagtacgtacagagagaagctctcagggttcccctg
gtctttcgagaaaaggatggactgggaattaagatgccggaccctgatttcacggttcga
gatgtcaaactcctagtggggagccggcgactggtggacgtgatggatgtaaacacccag
aagggcacggagatgagcatgtcccagtttgtgcgttactacgagacgcccgaggcgcag
cgggacaagctgtacaacgtcatcagcctcgagttcagccacaccaagttagagcacttg
gtcaagcgtccgactgtggtagatctggtggattgggtggacaacatgtggccccagcat
ctgaaggagaagcagacagaagccacaaatgccatcgcagagatgaagtaccccaaagtg
aagaagtattgtctgatgagtgtaaaaggttgtttcactgacttccacatcgactttgga
ggcacttccgtttggtaccatgttttccggggtgggaagatcttctggctgatccctcca
acactgcacaatttggcactctatgaggagtgggtgctgtcaggcaaacagagtgacatc
tttctgggagaccgcgtggaacgatgccaaagaattgagctgaaacagggctacacgttt
ttcattccttccggttggatccatgccgtctacacccctgtagactctctggtgttcggc
ggaaacatcctgcacagcttcaacgtgcctatgcagctacggatctacgagatcgaggac
agaacacgggtgcaacccaagttccgttaccccttctactatgagatgtgctggtatgtc
ttggagagatacgtgtactgtgtgacccagcgctcctacctcactcaggagtaccagaga
gaatccatgcttattgatgcttgcagaaagcccagcatagacggcttctcatctgattcc
tggctagagatggaggaggagtcctgtgaacagcagctccaggaggaggaggagaaggaa
gaggaagagggggagggtgtggataaggctcccaagcctcccactgatggtcctgcctcg
cccaccagcaccccctccgaggaccaggaggcccccgggaagaagtccaaagcgcctgcc
atgcggttcctcaaaaggactttgtccaacgagtcagaggaaagcgtgaagtccaccacg
atgccggtagactaccccaagacacccactggctcccctgccacagaggtcgccaccaaa
tggacccacctcactgagtttgaactgaagggcctgaaggctttggtagagaagctggaa
tccctcccagagaacaagaagtgtgtccctgagggcatcgaggatccgcaggcactcctg
gagggcgtgaagaatgtcctgaaggagcatgctgatgatgaccccagtctggccatcact
ggggtccctgtggtcacttggccaaagaagactccaaagaaccgggctgtgggtcggccc
aaggggaagctgggcccggcctccgcggtgaagttggctgccaaccggacaacggcagga
gctcggcggcgccggacgcgatgccgcaagtgcgaggcctgcctgcggaccgagtgtgga
gagtgccacttctgcaaggacatgaagaagttcgggggccctgggcggatgaagcagagc
tgcatcatgcggcagtgcatcgcgccagtgctgccccataccgccgtgtgccttgtgtgt
ggcgaggcggggaaggaagacacggtggaagaagaggaaggcaagtttaacctcatgctc
atggagtgctccatctgcaatgagatcatccaccctggatgccttaagattaaggagtca
gagggtgtggtcaacgacgagcttcccaactgctgggagtgtccgaagtgtaaccacgcc
ggcaagaccgggaaacaaaagcgtggccctggctttaagtacgcctccaacctgcccggc
tccctgctcaaggagcagaagatgaaccgggacaacaaggacgggcaagagcctgccaag
cggaggagcgagtgtgaggaggtgccccggcgcaggtcggacgagcaccccaagaaggcg
cccgcggacggcatcctgcgcagaaagtccgacgacgtgcacctgaggaggaagcggaaa
tacgagaagccccaggagctgagtggacgcaagcgtgcctcgacgcttcaaacgtccccc
ggttcctcctctcacctctcgccgaggccccctctaggcagcagcctcagcccttggtgg
agatccagtctcacttacttccagcagcagctgaaacctggcaaagaagataagcttttc
aggaaaaagcggcggtcctggaagaacactgaggaccggatggcgctggccaacaagccc
ctacgccgcttcaagcaggaaccagaggatgatctgcctgaggcacccccaaaaaccagg
gagagcgatcactcacgctccagctcacctactgccgggcccagcaccgagggggctgag
ggcccggaggagaagaagaaggtgaagatgcgtcggaaacggcggcttcccaacaaggag
ctgagcaaggagctcaaccacgagatccagaagacggagagcagcctagctgacgagaac
caccagcccatcaagtcggagcccgaaagtgagaatgaggagcccaagaggcccctgggc
ctctgtgagcgcccccatcgcttcagcaaggggctcaacggcacctcccgggagcagctg
cggcaccagctggggcctggcctgcgcagtccaccccgtgtcatctcccggcccccaccc
tccgtgtccccgcccaagtgcatccagatggagcgccatgtgatccggccgccccccata
agccccccacctgactcactgcccctagatgatggggcagcccacgtcatgcacagggag
gtgtggatggccgtcttcagctacctcagccaccaagacctgtgtgtctgcatgcgggtc
tgcaggacctggaaccgctggtgctgcgataagcggttgtggacccgcatcaacctgaac
cactgcaagtccatcacgcccctgatgctgagtggcatcatccggcgacagcccgtctcc
cttgacctcagctggaccaacatctccaagaagcagctgagctggctcatcaaccggttg
cctggactccgagacttggtgctgtcaggctgctcgtggattgcggtctcggccctctgc
agttccagttgtccattgctccggaccctggatgtccagtgggtagaaggactgaaggat
gcccagatgagggatctcctgtccccacccacagacaacaggccaggtcagatggacaat
cggagcaagctccggaacatcgtggagctgcgcctggcaggcctggacatcacggacacc
tccctgcggctcatcattcgccacatgcccctgctctccaagctccatcttagttactgt
aaccacgtcactgaccagtccattaacctgctcactgctgttggcaccaccacccgagac
tccttaaccgagatcaatctgtcagactgcaataaggtcactgatcagtgcctgtccttc
ttcaaacgctgtggaaatatctgtcatattgacctgaggtactgcaagcaagtcaccaag
gaaggttgtgagcagttcatagccgaaatgtctgtgagtgtccagtttgggcaagtggaa
gaaaaactcctgcaaaaactgagttag
DBGET
integrated database retrieval system
