Chryseobacterium taihuense: NCTC12078_00685
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Entry
NCTC12078_00685 CDS
T07055
Symbol
bepF_1
Name
(GenBank) Efflux pump periplasmic linker BepF
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
ctai
Chryseobacterium taihuense
Pathway
ctai01501
beta-Lactam resistance
ctai01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ctai00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NCTC12078_00685 (bepF_1)
01503 Cationic antimicrobial peptide (CAMP) resistance
NCTC12078_00685 (bepF_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ctai03036
]
NCTC12078_00685 (bepF_1)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ctai02000
]
NCTC12078_00685 (bepF_1)
01504 Antimicrobial resistance genes [BR:
ctai01504
]
NCTC12078_00685 (bepF_1)
Chromosome and associated proteins [BR:
ctai03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
NCTC12078_00685 (bepF_1)
Transporters [BR:
ctai02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NCTC12078_00685 (bepF_1)
Antimicrobial resistance genes [BR:
ctai01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NCTC12078_00685 (bepF_1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YknX_C
BSH_RND
BSH_CusB
Beta-barrel_RND
HH_AprE
BSH_YknX
Biotin_lipoyl
BSH_CzcB
HH_MFP_RND
RND-MFP_C
Beta-barrel_RND_2
Rod_CreS
MPS3_helical
SPC25_N
HH_EMRA
HH_CzcB
AAA_31
BSH_ALG44
CEP63
HH_YBHG
Motif
Other DBs
NCBI-ProteinID:
VFB02705
LinkDB
All DBs
Position
1:complement(733323..734507)
Genome browser
AA seq
394 aa
AA seq
DB search
MTNKLILFSAGTLLLTACKEEAPKQDGPKPYPVVSVENKNIVGYDTFPATIQGRINNDVR
AKIQGYITQVLVDEGQYVTKGQPLFRLETNILTENAAASKAGIAAAESSIAAARAQVSAA
EVEVNKLKPLVQKNIISNVQLQTAQANLAQAQAGLQQAVAARKQAVANYKGVEANIDYSV
IRAPISGVIGKLPLKVGSLVGPTDQTPLTTISDTSEIFAYFSMNEKSYFDFLEKSVGANL
SEKIKNLPMVELQLANGSIYPEKGRIEAITGSIDETTGTIQFRVVFKNAQKLLSNGNSGT
IRFPKNFDNVLVVPESATYEQQGIVYVYKVDKDTAKNVVVNVIDRIDNLALIKDGVKQGD
KVVAQGTGSLKNGTPVKPQPTTTDEVVKSIKPKF
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgacaaataagcttatactattttctgcgggaacattattgcttactgcctgcaaagaa
gaagctccaaaacaggatggtcctaaaccttatcctgtagtttctgtagaaaataaaaat
atagtgggctatgatactttcccggcgactattcagggaagaataaataatgatgtaaga
gctaaaattcaagggtatattactcaggttttggtagatgaaggacagtatgtaactaaa
ggacagccattattcaggcttgaaaccaatattctgaccgaaaatgcggcagcctccaaa
gcaggcattgccgctgcagaatccagcattgcagcagcccgggctcaggtaagtgctgca
gaagtggaagtaaataaactaaagcctttagtacagaaaaatattatcagcaatgtgcag
ctacagaccgctcaggcaaatcttgcacaggcacaggcaggattacagcaggcggttgca
gcaagaaaacaggcggttgcaaactataaaggagtagaggccaatattgattattcggtg
attcgtgcgccaatttccggagttattggtaagttacctttaaaagtgggaagtttggta
ggtcctacagatcagactcctcttaccactatttcagatacatccgaaattttcgcttac
ttttccatgaatgaaaaatcttattttgattttctggaaaaatctgtcggtgcaaatctt
tctgaaaaaatcaaaaacctgccaatggtggaacttcagcttgctaacggaagcatctat
cctgaaaaagggagaattgaagccataacaggctctattgatgaaactaccggaaccatt
cagttcagggtagtattcaaaaatgcgcaaaaacttttaagtaacggaaacagcggaact
ataagattccctaaaaactttgataatgttttggttgttccggagagtgctacctacgaa
cagcagggtattgtttatgtttataaagtagataaagatactgctaaaaatgtggtggta
aatgtgattgaccggattgataatttagcactcatcaaagatggagtaaaacaaggcgat
aaagtagtggctcaaggtaccggaagtctcaaaaacggaactccggtaaagcctcagccg
accactaccgatgaagtcgtaaaatctataaaaccgaaattctaa
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