Cryptococcus tetragattii: 91990149
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Entry
91990149 CDS
T10981
Symbol
I308_103293
Name
(RefSeq) hypothetical protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
cteg Cryptococcus tetragattii
Pathway
cteg03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cteg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
91990149 (I308_103293)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cteg03400
]
91990149 (I308_103293)
Enzymes [BR:
cteg01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
91990149 (I308_103293)
DNA repair and recombination proteins [BR:
cteg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
91990149 (I308_103293)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
RNA_ligase
TraG-D_C
Motif
Other DBs
NCBI-GeneID:
91990149
NCBI-ProteinID:
XP_066614177
LinkDB
All DBs
Position
5:758610..762149
Genome browser
AA seq
923 aa
AA seq
DB search
MSMTDILFESFAKLIYRLGNPPRSQVTNDPYSPDEIFTSWLNHLCKPFPIHTGKRLFRLL
FPHLGPRRRYGLKEQKLAQELSKILGAKTLNKWDSVRRNDIGETGTGCLGHEIEALAKNR
STSGENGRSLLTISALDTLLDELAASSSFSQLSQLPDAPRSIDKTLTILYCEWKLSPYAL
SVLTQIILRDLRPLQDPIPCVPIRNPTALLRIKTKNSPCQLSLKDAMMCWDKRMWDLYNG
GYGNLDLCADLLEQNPLMDPSKNHGPIVGVNVAIPKCKKGRSIRDTIKEFTGTRYRGCSK
AIWAETKYDGYRMQIHVDAQNPYPKITIFSKSTRDSTQDRFNTHAIICHALNLPVNPSLP
LHRLLSQRIQSTTAICPQRKVHKSVILEAEVVPFNENSREGDRGPGIEEFWWLGHAGVSA
GAMNWAFSGKSLPSVSSRHLCLVFFDILHIDGEGLLNHTYEERRRLLEDIIMIIPGFSQL
AESTKISLQGQPEHVLDDLEYVFKKSINLREEGLVIKAAESTYTNMRWQWVKLKKDYIPN
LGDCIDLVLLGAGWDINRARELRVDTSVFTTFYVGALTNAERAKSRCETPHFEILFPVSY
GCCRSELEAYNENIRLGRWKNKPFDKDDPFKRRLIGLSWTYSLQRGMTPPSVLFERPMCA
EVMGAGFQKLPGSELYELRWPRLQKIYDPRERQWTEALSALSLISNAHSSLGYKRLSASS
YGKSSPRFQDSIDAAWRSASHRSITDIPDFLSPSPKLQGQKRSKSEADLSDCKVKDEPLT
PRSSPLGPSATGKVEAAKRKYAEMASRRLREVMEKEEGMTHESGTEIPLLKRRRLSSSAG
PSLSVIPFKEKVQSVKLHGLTSLISTAGQSTEEPLAKRLSEASGIAATTMQQKARNSDVE
RWGKPLSLKSRIKLAMRQAGKVS
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgacggacattttgttcgaaagctttgctaagcttatctatcgccttggaaat
ccaccgaggtctcaagtgaccaacgacccctattcaccagatgaaatattcacctcatgg
ctcaaccatctgtgcaaaccctttcccattcacactgggaaacgtctgtttcgtctacta
ttcccccatttgggacccagaagaagatatgggttgaaggaacaaaagcttgcccaggag
ctttccaaaattttgggcgcaaagaccttgaacaaatgggacagtgttcgccggaatgat
ataggtgaaacagggacaggctgtctaggtcatgagatagaagcactagcaaaaaatcga
tcgacatccggcgagaatggcagatcccttctaaccataagtgcgctggacaccttgctt
gatgagctagccgcttcttcatcattctctcaactgtctcaacttcctgatgctcctcgg
tcaattgataaaacacttactattctatattgcgaatggaaactttcaccctacgctctt
tccgtcctcactcagattattttgcgcgatctgcggccccttcaggatccgatcccatgt
gtacccattaggaatcctactgctttgctgcggatcaagactaaaaattcgccttgccag
ctgagcttaaaagacgctatgatgtgctgggataaacgtatgtgggatctctataacggg
ggatatggtaacttggacctttgcgcggatcttctggaacaaaatccactaatggacccc
tccaagaaccatgggcctatcgtaggggtcaatgtcgcaatcccaaaatgcaagaaaggc
agatcaattcgagataccataaaagaattcaccggcacaagataccggggatgttctaag
gctatctgggcagagactaagtatgacggctatcgcatgcaaattcacgtggatgcccaa
aatccatatcccaagattacgatttttagcaaatccaccagggatagcactcaagacagg
ttcaatactcatgctattatatgccatgctctcaaccttcctgtaaacccgagtcttccc
ctgcaccggttactgtcgcagagaatacagtcaactactgccatttgtcctcaacgcaag
gttcacaaatctgtcattctagaggcagaggttgtgcccttcaacgaaaactctagagaa
ggagatcgtgggccaggaatagaggagttctggtggttgggacacgcaggggtttcagca
ggagctatgaactgggcattctccggcaaaagcctcccgagcgtttcaagccgtcatttg
tgcctcgttttctttgatatattgcatattgatggtgaaggattgctcaaccatacttac
gaagagcgaaggaggttgctagaggacatcatcatgattataccgggctttagtcagctg
gctgaaagcaccaaaatttctttgcaaggccagccggagcatgtcttggatgacctggaa
tatgtcttcaaaaagagcatcaatcttcgggaagagggtttggttatcaaagccgccgag
tccacttacactaatatgcgatggcaatgggtgaaattgaagaaagactacattccaaac
ctgggtgattgtattgatttggtccttcttggcgcaggctgggacattaatcgggcacga
gagttacgagtcgatacatctgtctttaccacgttctacgttggtgcgctcactaacgca
gagcgcgccaaatctcgctgcgagactcctcattttgagattctattccccgtgtcttat
ggttgttgcagaagtgaattggaggcgtataatgagaacatacgactgggtagatggaag
aataaaccatttgacaaggacgatccatttaaacgacgattgatcggtctatcttggaca
tactcattgcagaggggaatgacgccaccttctgtgctcttcgaaaggcctatgtgtgcc
gaagtcatgggtgctggattccaaaaactgccgggttcagagctttacgaattacggtgg
ccaaggctccaaaagatctatgatcctcgcgaacgacagtggacggaagctctttctgca
ctttctttgatttcgaacgcccactcttctctgggctacaagcgtttatcagcatcatcc
tatggtaaaagctctcctcgctttcaagactcgatagacgccgcttggagatcagcaagt
caccgcagcattacggacatacctgattttctatcgcctagtccaaaattgcaagggcag
aagaggtcaaaatcagaggctgacctatcggactgcaaggtgaaagatgaacctttgacc
ccacgatcgtcccccctaggaccgtcagctacaggtaaggtggaagctgctaaaaggaag
tacgcagaaatggctagcagacgactgagagaggtaatggaaaaagaagaaggaatgact
cacgaatcagggactgagattccactattaaagaggagaagactgtcctcatccgctggt
ccatccttgtccgtgatacctttcaaagagaaagtgcaatcggttaaattacatgggtta
acctcccttatatcgactgctggtcagtcgacggaagagccattggcaaagcgactgtcg
gaggcatctggaatagctgcgacaaccatgcagcagaaagcaagaaattcagatgttgaa
aggtggggaaagccattgtcattaaagtcaagaataaagctggcaatgagacaggctggg
aaggtttcgtaa
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