Yamadazyma tenuis: 18248553
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Entry
18248553 CDS
T03099
Symbol
LIG4, PSN45_003009
Name
(RefSeq) DNA ligase (ATP)
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
cten
Yamadazyma tenuis
Pathway
cten03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cten00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
18248553 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cten03400
]
18248553 (LIG4)
Enzymes [BR:
cten01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
18248553 (LIG4)
DNA repair and recombination proteins [BR:
cten03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
18248553 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
BRCT_2
BRCT
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
mRNA_cap_enzyme
DOCK_N
Motif
Other DBs
NCBI-GeneID:
18248553
NCBI-ProteinID:
XP_006683653
UniProt:
G3AXI9
LinkDB
All DBs
Position
3:complement(1295884..1298310)
Genome browser
AA seq
808 aa
AA seq
DB search
MYNIPNESNHTKLLREWKTQFHHLQLQNSDPNLSHLPRKICQVIGNRRSLQHKITKKYSV
NQINEVLDQLSNATKTEDRIKILRPVFDNLQIDEIRWLLNIILKISNAGYMERFVFELWN
ENCYGLYTVCHDLSKAFRYFSVHDSIDQKQLIPHVNFPFIPQASQKLTASYTKLCSEMSE
FYIEEKIDGDRMVLHYNNNKFKFFSRRCRDYSLLFGENFEVGSLTKHLKNVFHPKVTKLI
LDCEIVAFDADRKCILPFGTLRKAAIQEAVKEFTTTDMFSEHGCWPYLLVFDILQVNDTS
LVNAPLYQRKLALEKAIIEVPNRLEILKYKLCKDPIDIENAVKGVIVDRSEGIMVKNTMS
KYHVAKRDNSWIKVKPEYLESFGENLDLVVIGVLPGIKNSYMCGLYDTETHMWRSFCTVA
NGFTNEEFAELDRLMKDKLSRVCPENVMFGRRKPQYYLNPEESVVLEIKARVYDQRTDET
YATNTTLRNLYCRGIRHDKSWDDCISYQSYEEQRSDRTKDIYETQDVNKRRRVKEESFTE
TTFRENMKANMELFKDYRFVVLSDKLDQVENMRISLESLKNLIKKFGGEIITSPSYSKSK
PCLVISEKLTPRCRAYVELGLDIVHPNWLFYCIEYGKIIPMECLTVFESKNKVPENFDEY
GDSFAVTPRMNLKDYLLSLKIEKSPSHQIINDLSGELESYRLLKDILAGSKFLIISNGIQ
CTKTILATKIQQFGGTVVEKLPCEYIIVPRSLYKKSRKAMLSEVRRLSQQISNTYTKGTR
IPNIVIESFIDSTIESSVKVDPQDHKVL
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgtataacattcccaacgagtctaatcataccaaattacttcgtgaatggaaaactcaa
ttccaccatctccagctccagaactcggatccaaacttgtcacatctccccaggaaaatt
tgtcaggtaataggtaaccgtcgaagtctccagcataaaatcaccaaaaagtactctgtg
aaccagataaatgaagtgttggatcaattgtcgaatgctaccaaaactgaagacagaatc
aagatattgagaccagttttcgataatctccaaattgatgaaatcagatggttgttgaat
atcatcttgaaaatatccaatgctggatatatggaaagatttgtgtttgaattatggaac
gaaaactgctatggtctttacacggtatgtcatgatctatccaaggcattcaggtacttt
agtgttcatgattcaattgaccagaagcaattgattccgcatgtcaactttccatttata
ccacaagcttcccagaaattgacggctagttataccaaactctgttcagagatgtcagaa
ttctatattgaagaaaagatcgatggtgatcggatggtgctacattataataacaataaa
ttcaagttcttctctagaagatgcagagactatagtttattgttcggggaaaactttgaa
gtgggttctttaaccaagcatctcaagaatgtgtttcaccccaaggttactaaactaata
cttgattgtgaaattgtagcatttgatgctgatagaaagtgtattttaccattcggaacc
ttgagaaaagctgccattcaggaagcagtaaaggagtttacaacaactgatatgttttct
gaacatggttgctggccttatcttttggtgtttgatatactccaagtaaatgacacctcc
ttggtaaacgcccctttgtatcaaagaaaactagcactagaaaaagctataattgaggtt
cccaacaggttggagatcttaaagtacaagctctgtaaagatccgattgatattgagaat
gcggttaaaggtgttattgtcgacagaagcgaaggaatcatggtaaaaaatacaatgtca
aagtatcacgttgcaaaaagagataactcctggatcaaagtaaagccagagtacttggaa
ctgtttggagagaacttggatctcgttgtgattggagtccttccaggtataaagaacagc
tatatgtgtggtctttatgacactgaaactcatatgtggagaagcttctgtaccgttgcc
aatggtttcacaaatgaagaatttgccgagcttgacagacttatgaaagataagctctcg
agagtatgtcctgaaaacgtgatgtttggtaggcgtaaacctcaatattatctaaatcct
gaagaatcggttgttctagaaataaaggctagagtttatgaccagagaacagacgaaaca
tatgccaccaataccacgttaaggaatctctattgcagaggcattagacatgataagctg
tgggatgactgcattctgtaccaatcatatgaagaacaaaggagcgaccggactaaagat
atttatgaaacgcaggacgttaataagagaagaagagttaaagaagagtcgtttactgaa
acaacttttagagaaaacatgaaagcaaatatggaattattcaaggattaccgattcgtg
gttctctctgataaattagatcaagttgaaaacatgagaatactgcttgaaagtttgaaa
aatcttatcaagaaattcggtggagagatcattacaagcccatcgtattcgaaatcaaag
ccatgtttggttatctccgaaaagcttacaccgagatgccgggcctatgtagaactaggg
ttagatatagtacaccctaattggttattctactgcatagagtatggaaagattattccg
atggaatgtttgactgtgtttgaatccaaaaacaaggtgcccgaaaactttgacgagtat
ggggatagttttgcagtgactcccagaatgaatctcaaagactatttgctactgttgaaa
atagagaagtccccatcgcaccaaattataaatgatttgagtggggaactcgaatcatac
cggttgctaaaagatatcttggcaggatccaaatttctaatcatttccaacggcatacaa
tgtactaaaactattttagcaaccaaaatccagcagtttggaggtacagtagtggagaaa
ttgccatgtgaatatataatagtcccccgactgttgtacaaaaagagccgaaaagcaatg
ctctcagaagttagacggcttctgcaacaaatcagcaacacatacaccaaagggacccgt
atacccaacattgtgatagagtcatttatagacagcaccattgaatccagcgtaaaagtg
gatccccaagaccataaagtgctctaa
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