Yamadazyma tenuis: 18249535
Help
Entry
18249535 CDS
T03099
Symbol
PSN45_000825
Name
(RefSeq) uncharacterized protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
cten
Yamadazyma tenuis
Pathway
cten03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cten00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18249535 (PSN45_000825)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cten03041
]
18249535 (PSN45_000825)
Spliceosome [BR:
cten03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
18249535 (PSN45_000825)
Complex C
U5 SnRNP specific factors
18249535 (PSN45_000825)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFG_IV
EFTUD2
GTP_EFTU_D2
EFG_III
MMR_HSR1
EF-G_D2
Ras
jr-ZPR1
TOBE
Motif
Other DBs
NCBI-GeneID:
18249535
NCBI-ProteinID:
XP_066013628
LinkDB
All DBs
Position
1:1709751..1712702
Genome browser
AA seq
983 aa
AA seq
DB search
MVNDDDKYDEFGNLIGGEDSDSDVSSEGELMRQNLSDISGDEEEVKDDDDEEEEPNESQQ
AQLVSYKNNANGLTLSQRFGPEVTTVVAHTEDSMSEPVIRPARERTGKIEVTISDDTDPY
TDSSHRVRYSLDYMVNLMYQLPERIRNIALVGNLHSGKTSFVDMLVLQTHETLTRKQSKN
FEQLKFTDNHILEIKRGMSIKAAPITLLLPDTNGKSYIFNILDSPGHMNFMDETIASLEA
SDGAVIVLDVVEGLTFADKFVIDEIMKRNLKFSLVLNKIDRLILELRLPVSDAYYKLQYI
IDNINNYISNSEYSASYAYDPILSPERNNVTFASSTLQFCFNLNSFVQLYFDAKDITTID
KEVFARRLWGNNYYNPESHKFTKDSKGGSLSRTFIHFILEPIYKIITYTITRDSNSELLP
TLLKDNFGISFTAKQLKNNSQMLLPEIFLAIFPSGNGFVNMVTNSIYSPAEAIKPVSVVF
QEPVSQDKVIAHIVKLIESSDGESFSALVRIHQGTLKVGDQVNVISDTFKTETEVHLQTV
SEIHIPGGRYKVPVNEASEGFLVIVKGIETSINKHGYIFDKSIGVSDIKDTKFIDYTSES
VLKVAVEPKNPSELPRLVESLKKLNKGYLSSVVKLEESGEYVVFGTGEVILDCMLHDIRN
FYEDGLEIRVSDPMVKFSETVTEMSVTKISSTIGDISMSIIAEPINNEALSKALEAGKID
LNQPIKTVSRQLRNDFGVDSLEARSVWSYGPHDHKQPSILVDDTLEAETDKKALYTIKQA
IEMGFQWSCSEGPLCDEPIRNTKFKILDIDFNDTADIQTNTAQIIPLTRRACYTGFLTAS
PRLMEPVYKVLVTCSSRANHLIAKLLNGRRGKIHTNDAIPGTQLFQLEGIVPVIESIGFE
TELRLQTQGQAMCLMKFDGYSMAPGNPLDDEVYLPELKPVPMESIARDFVLKTRRRKGLT
GEASLHKYIDPELYEKLKSIGLK
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atggtcaacgacgatgacaagtacgatgagtttggaaatctcattggaggagaagattca
gattcagatgtgtcttctgagggtgaactaatgcgccagaatctttcagatatatctggc
gatgaggaagaagtgaaagatgatgatgatgaagaagaagaaccaaatgaactgcaacaa
gcacagcttgtgtcgtataaaaacaatgcaaatggcctcacgctatcccaaagatttggg
cctgaagtcaccacggtggtggcccatacagaggactcaatgagtgaacctgtcattcga
ccagcacgagaaaggacaggtaaaatagaagttaccatcagtgacgacacagatccatac
acagattcgtcccacagggtgaggtattcattggattatatggtgaatctcatgtaccag
cttcctgaacgcataagaaatatagcattggtaggaaaccttcacagtggaaaaacatca
tttgtggatatgcttgtattacaaacacacgaaaccttgactcgaaagcaatccaaaaac
tttgaacaattgaagtttacagataaccacattttggaaataaaaagaggaatgtccatt
aaggctgctccaataacacttttgttgccagataccaatggcaagtcttacattttcaac
atccttgatagtcctgggcacatgaacttcatggatgagacaattgcttcgttagaggcc
agtgatggagctgttattgttcttgatgtggttgaaggccttacttttgcagataagttc
gtgatcgatgagattatgaagagaaacttgaagttttcgttagttctcaataagatcgat
agattgatcttggaattgagactcccagtaagcgatgcatactacaagctacagtacatt
atagacaacatcaacaactatatctcaaacagcgagtatagtgcctcgtatgcctacgac
cccatactatcacctgagcgaaataatgtaacgtttgcatcttcaaccttacaattctgc
ttcaacttgaacagctttgttcagctttactttgacgccaaagatataaccactattgat
aaagaggtttttgcaagacgattatggggaaacaattactacaaccccgagtcccataag
ttcaccaaagattccaagggtggatcattatcaagaacgtttattcacttcattctcgag
cccatttacaagatcatcacctacactataaccagagactctaactcggagttattaccc
acgctcttgaaggacaatttcggtatctcgttcactgctaaacagttgaagaacaactcg
caaatgctcttacccgaaatcttccttgcaatatttccaagcggtaacgggtttgttaat
atggtcacaaacagcatctattcacctgctgaggctatcaaaccagtttctgtggtgttc
caggaaccagtatcgcaggataaggttattgcacatatcgttaagctcatcgagtcgtca
gacggagaatcattttctgccttggtcagaatccaccaaggaactttgaaagttggagac
caggtgaatgttatcagtgacacttttaaaacagaaacagaagtacacctccaaaccgtg
tccgagattcatatacctggtggaagatacaaggtaccggtcaatgaagccagtgaaggg
tttcttgtcattgtgaaaggaatcgaaaccagcatcaacaaacacggatatatttttgac
aagtcgattggtgtcagtgacatcaaagataccaaattcattgactacacgagcgaatcg
gttcttaaagttgctgtggaaccgaaaaacccatcagagctaccaagacttgtagagtca
ttgaagaaactaaataaggggtatttgtcgagtgtggtgaagcttgaagagagtggtgag
tacgttgttttcgggactggagaagttatacttgattgtatgcttcacgacatcaggaat
ttctatgaagacggattggaaatcagggttagtgaccctatggttaagtttagtgaaaca
gtgacggagatgtctgtcacaaagatctccagtaccatcggtgatatttccatgtccata
atagctgaacccatcaataacgaagcattgagcaaagccctagaagctgggaaaattgac
ttgaaccaacctataaaaacagtctctcggcaacttcgaaacgactttggggtagacctg
ctcgaagctcggtcagtctggagctatgggccccacgaccataagcaaccgagcatttta
gtggacgatacgttggaagctgagacggataaaaaggccctatacacaatcaaacaggcc
attgaaatggggttccagtggagctgtagcgaaggtccgttgtgtgatgagccaatcaga
aataccaagtttaaaatacttgacatcgactttaatgacaccgcagacattcaaaccaac
actgcccaaataattccgttaacaaggagagcctgttacacaggattcttaactgctagt
cctcggttgatggaaccagtatacaaggtgcttgtgacgtgctcgtctagagcaaaccat
ttgattgcaaaactccttaacggcagaagaggtaaaattcacaccaatgacgcaattcct
ggaactcagcttttccagctagagggaattgtaccagttatcgagtcgattggctttgaa
acagagcttagattacaaacccaaggtcaggccatgtgtttgatgaagttcgacggatat
tcaatggccccaggaaacccattagatgatgaggtttatttaccggagttgaagccggtt
cccatggagtcaatagctcgggattttgttctcaaaacaagaagaagaaagggtctcact
ggagaagccagtttacacaagtacatcgaccccgagctctacgagaagttgaagtctatt
gggttgaaatga
DBGET
integrated database retrieval system