Clostridium thermosuccinogenes: CDO33_12490
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Entry
CDO33_12490 CDS
T05300
Name
(GenBank) vancomycin resistance histidine kinase VanS
KO
K18350
two-component system, OmpR family, sensor histidine kinase VanS [EC:
2.7.13.3
]
Organism
cthd
Clostridium thermosuccinogenes
Pathway
cthd01502
Vancomycin resistance
cthd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cthd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CDO33_12490
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CDO33_12490
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cthd01001
]
CDO33_12490
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
cthd02022
]
CDO33_12490
01504 Antimicrobial resistance genes [BR:
cthd01504
]
CDO33_12490
Enzymes [BR:
cthd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
CDO33_12490
Protein kinases [BR:
cthd01001
]
Histidine kinases
OmpR family
CDO33_12490
Two-component system [BR:
cthd02022
]
OmpR family
VanS-VanR (VanE type vancomycin resistance)
CDO33_12490
Antimicrobial resistance genes [BR:
cthd01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Ser type [MD:
M00652
]
CDO33_12490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
HATPase_c_5
Spectrin_Anc-1_2
DUF3810
Motif
Other DBs
NCBI-ProteinID:
AUS97183
UniProt:
A0A2K2FAX2
LinkDB
All DBs
Position
complement(2884826..2885953)
Genome browser
AA seq
375 aa
AA seq
DB search
MTDKRDKRRNDYIKLKRKVFFQMLLITVTAAVTVYLLRNILRGQIGDRIVRFLIDVFSFS
YSDAYTIYNLVFRKNMDKILFFVTLIFLVILFRFSISWLTKYFDEISIGMDKLTDETDEE
ITLSPELDFMENKINQIKNKLEKQKKAALDAEQRKNDLVVYLAHDIKTPLTSIIGYLSLL
NEAPDMPQEQKAKYVGITLEKAYRLEKLINEFFEITRFNLQTIVLNKEKINLLFMLQQMA
DEFYPLLTPQRKQVSVNVPEGLTLWGDADKLARVFNNILKNAIAYSYENSVIDISAKQQD
NYIKITFTNQGNPIPQTKLDTIFEKFYRLDSARSTNTGGAGLGLAIAKEIVNAHDGTISV
ESNTENTTFTVKLPV
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
ttgacagataagagggataaaagaaggaatgattatataaaattaaaaagaaaagtgttt
tttcaaatgcttctgataacagttactgccgcggtgactgtttatctgttgcgcaatatt
ctgcgtggacagatcggagaccgtattgtccggtttttaatcgatgttttttcttttagt
tattcagatgcatacacaatctataatcttgtattccgtaaaaatatggataagattctt
ttttttgtgactctgatatttttagtcatactttttaggttttccatctcatggctaaca
aaatattttgatgagatcagcatcggaatggataagcttacggatgaaaccgatgaagag
attacattgtcaccggagttggatttcatggaaaataagattaatcagataaaaaataag
ttggaaaagcaaaagaaagccgcccttgatgccgaacaacgaaaaaatgatttggtagtt
tatctggctcatgatataaagacgcctctgacatccatcataggatatttgagtcttctg
aatgaagctccggatatgcctcaggagcaaaaggcaaaatatgtcggtattaccttggaa
aaggcttatcggttagagaagcttataaacgagttttttgaaatcacaagatttaacctt
caaactattgttttgaataaggaaaaaataaatttgcttttcatgctccagcagatggcg
gatgaattctatccattgctgactccacaacgaaagcaggtgtcggtcaatgtgcctgaa
ggtttaactctgtggggagatgcagacaaactagcccgtgtgttcaacaatattttgaaa
aatgcgatagcctatagctatgaaaacagcgtcattgacatttctgccaaacagcaggac
aactatatcaaaataacttttaccaatcaggggaatccaatcccgcagacaaagcttgat
actatttttgagaaattttaccggttggattctgcgcgctccacaaacaccggtggagca
gggctgggcttggccatcgccaaagaaattgtcaatgctcacgacggaacaatatctgtg
gaaagcaacacagaaaatactacatttacagtaaagcttccggtataa
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