Caldimicrobium thiodismutans: THC_0040 Help Entry THC_0040          CDS       T04224                                  Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism cthi  Caldimicrobium thiodismutans Pathway cthi03030   DNA replication cthi03410   Base excision repair cthi03420   Nucleotide excision repair cthi03430   Mismatch repair Brite KEGG Orthology (KO) [BR:cthi00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     THC_0040    03410 Base excision repair     THC_0040    03420 Nucleotide excision repair     THC_0040    03430 Mismatch repair     THC_0040  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:cthi03032]     THC_0040    03400 DNA repair and recombination proteins [BR:cthi03400]     THC_0040 Enzymes [BR:cthi01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      THC_0040 DNA replication proteins [BR:cthi03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      THC_0040 DNA repair and recombination proteins [BR:cthi03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      THC_0040    NER (nucleotide excision repair)     GGR (global genome repair) factors      THC_0040    MMR (mismatch excision repair)     DNA ligase      THC_0040   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       THC_0040 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT DNA_ligase_ZBD HHH PTCB-BRCT HHH_3 BRCT_2 HHH_8 UPF0758_N DUF3701 RlmA_N zf-C4_Topoisom Motif Other DBs NCBI-ProteinID:  BAU22447 UniProt:  A0A0U5AVQ0 LinkDB All DBs Position complement(40007..42121) Genome browser AA seq 704 aa AA seqDB search MPEETRKEIPPEIVERVKKLREEIEYHNYRYYVLDSPVISDAEYDALMHELRELEAKYPE LITPDSPTQRVGFKPAEGFKEVPHREPMLSLDDAMEESEVIEFDRRIKRFLNLPENMPIE YTVEPKIDGLAIELVYEQGALRVGATRGDGYLGEDVTNNLKTIKTIPLRLRKFSEDAPEI PSRIDVRGEVYMTKEEFKKINEERIARKEIPFANPRNAAAGSLRQLDPQVTAKRKLDLFC YGVGYTEGYTFKTQWEVLQTLPKWGLKVNPMVKLASNIEEAIQYHKEIQRIRDTLPYEID GIVIKVNDLALWERLGTKARSPRYALAYKFQPTQSTTQLIDVVFQVGRTGAVTPVAILKP VKIGGVVVERATLHNEDFIKNLDIRIGDHVLVQRAGDVIPEIVMPIKEKRTGQEREIHFP THCPICGSKLVKKSGEAVWRCPNRSCYAQGVRRIMHFASRNAMNIEGLGTKVAQALVDKE MVQTPADLYYLKIEDFMKLPGFAYKKAKNLRDGIEKSKKTTLGRFLFALGIRHVGEAMAQ LLAERFKSLDKLIQASMADLTAIPGVGPEAAKSIVEFFRDEENQRMIEKLLQAGITFEEE EKEEALPKVLEGLTFVFTGALRSFSREEAKEIVTKLGGKATDSVSRNVNYVVVGEEPGSK YQKALSLGIKTLNEEEFLKLLEEKGVNLEKIMSKKTERTKTTLF NT seq 2115 nt NT seq  +upstreamnt  +downstreamnt atgcctgaggagacaagaaaggagattcctcctgagatagtggagcgggttaaaaaactg agggaagaaatagaataccataactatcgttattatgtgcttgatagccccgttatatcg gatgctgaatatgatgccctaatgcatgaacttagagagttagaggctaaatatcctgaa ttaattacccctgattccccaactcaaagagtgggctttaaacctgctgagggatttaaa gaagtcccccatagagagcccatgctctcccttgatgatgctatggaggaatctgaagtt atcgaattcgataggcgtattaaaagatttttaaatcttcctgagaatatgcccattgaa tacactgttgaacccaaaattgatggcttagctatagagcttgtctatgaacagggggct ctaagggttggagcaacccgtggcgatggctaccttggagaagatgtaactaataactta aaaaccataaaaaccatacctttgagattaagaaaattctctgaagatgccccagaaatt ccttcacggatagatgttcggggtgaggtatatatgactaaggaagaattcaaaaaaatt aatgaagaaagaatagccagaaaggaaataccctttgccaatcccagaaatgcagctgct ggttctcttcgtcaacttgatcctcaagtaactgccaaaaggaagcttgaccttttttgt tatggagtaggctataccgagggttataccttcaaaactcaatgggaggtattgcagacc ctaccaaagtggggacttaaagttaaccctatggtgaaattagcctcaaatatcgaagag gccattcaatatcacaaagaaattcaaaggataagagacactctaccttacgaaattgat gggattgttattaaggttaacgatttagccctatgggaaagactgggaactaaggctcgc tctccaagatatgccttagcttataaatttcaacccactcaatctaccactcagcttata gatgtagtctttcaggtgggaagaacaggggcggtaacaccggttgcaatccttaaacca gttaaaattggtggagttgttgtggagagagccacccttcacaacgaagactttatcaaa aaccttgatatccgcattggagaccatgtgcttgtccaaagagcaggggatgtgatacca gagattgttatgcctattaaagaaaaaagaactggtcaggaaagggaaattcattttccc acccactgtcccatctgcggaagtaaactggttaaaaaatccggagaagcggtctggaga tgtcctaatagaagttgctatgctcaaggagttagaaggatcatgcattttgcctctcgt aatgctatgaacattgaaggacttgggactaaggttgcccaggctctggtggataaagag atggttcaaaccccagctgatttgtattacttaaaaattgaagattttatgaaactacct ggttttgcctataagaaggccaaaaatctccgggatggaatagaaaagagtaaaaaaaca accttaggaagatttctctttgctcttggaattcgccatgtaggggaggccatggctcaa cttttagcagaaagatttaaatccttagataagcttatacaagcttccatggcagattta acagcaattcccggggttgggccagaagctgctaaatcaattgttgaattttttagagat gaggaaaatcagaggatgatagaaaaattgctacaggctggaataacctttgaagaagag gaaaaggaagaagcccttccaaaagtgcttgagggacttacctttgtatttacaggagca ctgcgctccttttcccgtgaggaggccaaagagattgtcacaaaattgggaggcaaagct acagactccgtttcccgaaatgtaaattatgtggttgtgggagaagaaccaggatcaaaa tatcaaaaggccctctccctgggaataaaaaccttgaatgaagaagaatttttaaaactc cttgaagaaaaaggggttaatttagaaaaaattatgtcaaaaaaaactgagaggactaaa acaactcttttttaa

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