Carboxydocella thermautotrophica: CFE_0199 Help Entry CFE_0199          CDS       T05389                                  Name (GenBank) DNA ligase (NAD+)   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism cthm  Carboxydocella thermautotrophica Pathway cthm03030   DNA replication cthm03410   Base excision repair cthm03420   Nucleotide excision repair cthm03430   Mismatch repair Brite KEGG Orthology (KO) [BR:cthm00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     CFE_0199    03410 Base excision repair     CFE_0199    03420 Nucleotide excision repair     CFE_0199    03430 Mismatch repair     CFE_0199  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:cthm03032]     CFE_0199    03400 DNA repair and recombination proteins [BR:cthm03400]     CFE_0199 Enzymes [BR:cthm01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      CFE_0199 DNA replication proteins [BR:cthm03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      CFE_0199 DNA repair and recombination proteins [BR:cthm03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      CFE_0199    NER (nucleotide excision repair)     GGR (global genome repair) factors      CFE_0199    MMR (mismatch excision repair)     DNA ligase      CFE_0199   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       CFE_0199 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT DNA_ligase_ZBD Nlig-Ia HHH PTCB-BRCT HHH_3 5_3_exonuc RNA_pol_A_CTD HHH_8 BRCT_2 Cdd1 Zn_ribbon_NUD PilB3_C Motif Other DBs NCBI-ProteinID:  AVX19408 UniProt:  A0A2R4MX30 LinkDB All DBs Position 203484..205487 Genome browser AA seq 667 aa AA seqDB search MDMEHARRRIEELRREIRRHNYLYYVLDQPVLTDAEYDALYRELLELEEQYPELITADSP TRRVGGEPLKAFGQVRHRIPLLSLDNAFNAEELRAFDRRVKQNLGGEDPEYMVEAKIDGL AVALTYEQGRFVQGATRGDGEVGEDITENLKTIQTLPLELPKAPPLLEVRGEAFMPKKAF VRLNAEREANGEPVFANPRNAAAGSLRQLDPKVTAKRSLAVFIYALAQTEGLEISTHAAA LDWLEQLGLPVNPQRRLCRDIEEVIALAEEWAVLRHQLPYDIDGLVIKVNKLSQQQRLGF TAKSPRWAIAYKFPAEQAETVVEDIEITVGRTGVLTPTAVLRPVFVAGSTVSRASLHNQD IIREKDVRIGDHVLIHKAGDIIPEVVRVLKEKRSGLEREFVMPEHCPACGSKVVRPEGEV AVRCPNRFCPAQNREAINHFVSREAMNIEGLGPAVVNQLLEAGLIRDAADLYNLREEDLL PLERMGKKSAQNLLQAIAASKERGLGPLLFALGIRHVGAKAAKTLARHFGSMEKLAAATQ EELQQIPEVGPKMAEAIVQFFADEHNRNLLNKLKAAGVKMEEDADPVTVDNLPLAGQTVV ITGTLSRMGRKEAEALVEQLGGKASSSVSKKTSFVVAGENPGSKLEKARALGIPVLSEEE FWQKISN NT seq 2004 nt NT seq  +upstreamnt  +downstreamnt atggatatggaacacgcccgccggcgcattgaggaattgcggcgggagatacgccgccat aattatctctattatgtgctggaccagcccgtattgactgacgctgaatatgacgccctc taccgggaattgctggagctggaagagcaatatccggagctgattacggctgattcgcct acccgcagggtaggaggagaacctttaaaagcctttggccaggtcaggcatcgcattccc cttttgagcctggataatgcctttaatgccgaggagctgcgggcttttgaccgccgggtt aaacaaaatctgggcggagaggacccggaatacatggtggaagccaaaatcgacggcctg gcggtggctctgacctatgagcagggccggtttgtgcagggagcaacccggggggatggg gaagtaggggaggatattaccgaaaacctcaaaaccattcaaactctgcccctggaacta cccaaggctccccccttgctggaggtgcggggagaggctttcatgccgaaaaaagcgttt gtccggttaaatgctgagcgggaagccaatggtgaaccggtttttgccaatccccgcaat gctgcggccggttctctgcgccagctggatcccaaagtgacagccaaacgctctctggcg gttttcatttatgctctggcccagacggaagggctggaaatttccacccatgccgctgcc ctggactggctggaacagctgggcctaccggtcaatccccagcgccgcctttgccgcgat atagaagaggtaatcgctctggcagaggaatgggcggtattacgccaccagctgccctat gatattgatggcctggtgatcaaggtcaataagctgagccagcagcagcgcctgggcttt accgccaaaagtccccgctgggctattgcctacaagttcccggccgagcaggcggaaaca gtggtagaagatattgaaatcacagtggggcgtaccggggtgctgacaccgacggcggtt ttgcggccggtgtttgtggctggcagtactgtcagccgggccagtttgcataatcaggac atcatccgggaaaaggatgtacgcatcggggaccatgtgctgattcataaagccggggat atcattcctgaagtagtcagagtgttgaaggaaaagcgcagcggtctggaacgggaattt gtcatgcccgaacactgtccggcctgtggtagcaaagtagtaaggccggaaggggaagtg gctgtgcgctgtcccaatcgtttctgcccggcccagaaccgggaggccatcaatcacttc gtctcccgggaggccatgaatatcgagggcttaggtccggcggtggtcaaccagttgctg gaagcgggcctgatccgggatgctgccgacctctataatttgcgagaagaggatttattg ccactggagcgcatgggcaaaaaatccgcccaaaacctgctgcaagctattgcagccagc aaggaacggggcctggggccattgctctttgccctgggcattcgccatgtgggggccaaa gcggctaaaaccctggcccgccattttggctccatggagaagctggcagcggctacacag gaggaattgcagcagatcccggaagttgggccgaaaatggcggaagccattgtccagttt tttgccgatgaacataaccgcaatttgctgaataagttaaaagcagccggggtgaagatg gaagaagatgcggatccggttactgtggacaatttgcctctggccggccagacggtggtc attaccggtaccttaagccggatggggagaaaggaagcggaagccctggtagaacagctg ggcggcaaggccagcagcagtgtcagcaaaaaaacctcttttgtggtagcaggggaaaac ccgggcagcaagctggaaaaggcccgggcactgggtataccggttttatcagaggaagag ttctggcagaaaatttcgaactaa

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