KEGG   Carboxydocella thermautotrophica: CFE_2387
Entry
CFE_2387          CDS       T05389                                 
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase/endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
cthm  Carboxydocella thermautotrophica
Pathway
cthm03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cthm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CFE_2387
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cthm03400]
    CFE_2387
Enzymes [BR:cthm01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     CFE_2387
DNA repair and recombination proteins [BR:cthm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     CFE_2387
 Prokaryotic type
     CFE_2387
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S HHH_5 RecR_HhH Ogg-HhH HHH_8 ZYG-11_interact
Other DBs
NCBI-ProteinID: AVX21530
UniProt: A0A2R4N374
LinkDB
Position
complement(2349553..2350185)
AA seq 210 aa
MNRELANRILDQLAHIWPDPRPALQYRNPFELLVATILSAQSTDEQVNKLTPALFARFPD
AQALARAGVEEVEEYIKGCGLYHNKARHLVAMARQLVEKYGGQVPDQRKELESLPGVGRK
TANVVLNNAFGQPALAVDTHVFRVANRLGLARADNVRDTEEQLMALLPRERWGQAHHWLI
FLGRTWCKARRPRCQECPVALDCQFPHKLL
NT seq 633 nt   +upstreamnt  +downstreamnt
atgaacagggaactggctaacaggattctcgatcagctggcccacatctggcctgacccc
aggcctgcccttcaataccgtaatccctttgagctgctggtagctactatcctctctgcc
cagtccactgatgaacaggtaaataaactcactccagccttgtttgcccgttttcccgat
gctcaggccctggcccgggctggagtggaggaagtggaagagtatatcaagggctgtggc
ctctatcataacaaagcccggcatctggtggccatggccaggcaactggtggaaaagtat
ggcgggcaggttccagaccagcggaaggagctggagagcttgcccggggtagggcgcaaa
acagccaatgtggtgttgaataatgctttcggacagccggctctggcggtagatacccat
gttttccgggtggccaaccgactgggattggcccgggcggataatgtcagagatacggaa
gaacagttaatggcgctgttaccccgggaacggtggggtcaggcccatcactggcttatc
tttctggggcgtacctggtgcaaggcgcgccggccccggtgccaggaatgtccggtagca
ttggactgccagtttccgcataagttgctctga

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