KEGG   Thermochaetoides thermophila: CTHT_0061890
Entry
CTHT_0061890      CDS       T03100                                 
Name
(RefSeq) hypothetical protein
  KO
K12608  CCR4-NOT complex subunit CAF16
Organism
cthr  Thermochaetoides thermophila
Pathway
cthr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cthr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CTHT_0061890
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cthr03019]
    CTHT_0061890
Messenger RNA biogenesis [BR:cthr03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     CTHT_0061890
SSDB
Motif
Pfam: ABC_tran AAA_21 AAA_29 AAA_28 AAA_25 DUF3584 AAA_23 AAA_15 AAA_22 AAA_16 PduV-EutP ORC-CDC6-like Dynamin_N SRP54 AAA_14 AAA RsgA_GTPase NACHT Arf KdpD AAA_13 nSTAND3
Other DBs
NCBI-GeneID: 18260227
NCBI-ProteinID: XP_006696505
UniProt: G0SFF8
LinkDB
Position
Unknown
AA seq 303 aa
MSTDPTSTSPPPPPSITTTNLSYTVPDTNTPILTSISLSLPPRSRTLLIGANGAGKTTLL
RLLAGKRLAPRGSIQVAGVDPFTHSPEGVTYLGLEWVLNQVVRRDVGVGELLKSVGGDAY
PERRDELVRVLDIDVTWRMHAVSDGERRRVQLAMGLIRPWRVLLLDEITVDLDVWSRARF
LGFLKKETEGRECTIVYATHILDGLAGWPTHLVHLFLGRVKGWGPAEEMLKEGEAKEDEE
EEDELVGRVEGNSRLGTLVMRWLREDLKERGPRNRRGPEGRSYMIGGIGGYGLECKAAME
EDR
NT seq 912 nt   +upstreamnt  +downstreamnt
atgtcaaccgacccaacctcaacttctcctccacctcccccctccatcaccacaaccaac
ctttcctacaccgtccccgacaccaacactcccatccttacctccatctccctgtccctc
cccccgcgctcccgcactctcctcatcggcgccaacggcgccggcaaaaccacactcctc
cgcctgctcgccggcaaacgcctcgcgccccgcggcagcatccaggttgccggggtcgac
cctttcacgcattcccctgaaggtgtgacttatctagggttggagtgggttttaaatcag
gtggttagacgggacgtcggcgtcggggagctattgaaaagtgttgggggggacgcgtac
cccgagaggagggatgaactagttcgggtgttggatattgatgttacgtggaggatgcat
gctgttagtgatggggagaggaggagggtgcagctggcgatggggctaattcggccgtgg
cgggtgttgctgctggatgagatcaccgtggatttggatgtgtggagtcgggcgcggttt
ttgggcttcttgaagaaggagacggaggggagggagtgcacgattgtatatgcgacgcat
atattggatgggttggccgggtggccgacacatttggtacatttgtttttggggagggtt
aaaggatggggaccggctgaggagatgttgaaggagggggaggctaaagaggatgaggaa
gaggaggatgagttggtggggagggtcgaagggaatagtaggctggggacgctggttatg
aggtggttgagggaggatttgaaggaacgagggccgaggaatagacgagggcccgagggg
aggtcatatatgattggggggattggagggtatgggttggagtgcaaggcagccatggag
gaggacaggtag

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