Thermochaetoides thermophila: CTHT_0061890
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Entry
CTHT_0061890 CDS
T03100
Name
(RefSeq) hypothetical protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
cthr
Thermochaetoides thermophila
Pathway
cthr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CTHT_0061890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cthr03019
]
CTHT_0061890
Messenger RNA biogenesis [BR:
cthr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CTHT_0061890
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_28
AAA_25
DUF3584
AAA_23
AAA_15
AAA_22
AAA_16
PduV-EutP
ORC-CDC6-like
Dynamin_N
SRP54
AAA_14
AAA
RsgA_GTPase
NACHT
Arf
KdpD
AAA_13
nSTAND3
Motif
Other DBs
NCBI-GeneID:
18260227
NCBI-ProteinID:
XP_006696505
UniProt:
G0SFF8
LinkDB
All DBs
Position
Unknown
AA seq
303 aa
AA seq
DB search
MSTDPTSTSPPPPPSITTTNLSYTVPDTNTPILTSISLSLPPRSRTLLIGANGAGKTTLL
RLLAGKRLAPRGSIQVAGVDPFTHSPEGVTYLGLEWVLNQVVRRDVGVGELLKSVGGDAY
PERRDELVRVLDIDVTWRMHAVSDGERRRVQLAMGLIRPWRVLLLDEITVDLDVWSRARF
LGFLKKETEGRECTIVYATHILDGLAGWPTHLVHLFLGRVKGWGPAEEMLKEGEAKEDEE
EEDELVGRVEGNSRLGTLVMRWLREDLKERGPRNRRGPEGRSYMIGGIGGYGLECKAAME
EDR
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccgacccaacctcaacttctcctccacctcccccctccatcaccacaaccaac
ctttcctacaccgtccccgacaccaacactcccatccttacctccatctccctgtccctc
cccccgcgctcccgcactctcctcatcggcgccaacggcgccggcaaaaccacactcctc
cgcctgctcgccggcaaacgcctcgcgccccgcggcagcatccaggttgccggggtcgac
cctttcacgcattcccctgaaggtgtgacttatctagggttggagtgggttttaaatcag
gtggttagacgggacgtcggcgtcggggagctattgaaaagtgttgggggggacgcgtac
cccgagaggagggatgaactagttcgggtgttggatattgatgttacgtggaggatgcat
gctgttagtgatggggagaggaggagggtgcagctggcgatggggctaattcggccgtgg
cgggtgttgctgctggatgagatcaccgtggatttggatgtgtggagtcgggcgcggttt
ttgggcttcttgaagaaggagacggaggggagggagtgcacgattgtatatgcgacgcat
atattggatgggttggccgggtggccgacacatttggtacatttgtttttggggagggtt
aaaggatggggaccggctgaggagatgttgaaggagggggaggctaaagaggatgaggaa
gaggaggatgagttggtggggagggtcgaagggaatagtaggctggggacgctggttatg
aggtggttgagggaggatttgaaggaacgagggccgaggaatagacgagggcccgagggg
aggtcatatatgattggggggattggagggtatgggttggagtgcaaggcagccatggag
gaggacaggtag
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