Crotalus tigris (Tiger rattlesnake): 120298978
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Entry
120298978 CDS
T08476
Symbol
PTPRF
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04514
Cell adhesion molecules
ctig04520
Adherens junction
ctig04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120298978 (PTPRF)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
120298978 (PTPRF)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
120298978 (PTPRF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ctig01009
]
120298978 (PTPRF)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ctig04515
]
120298978 (PTPRF)
Enzymes [BR:
ctig01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
120298978 (PTPRF)
Protein phosphatases and associated proteins [BR:
ctig01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
120298978 (PTPRF)
Cell adhesion molecules [BR:
ctig04515
]
Immunoglobulin superfamily
Type II RPTP family
120298978 (PTPRF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
fn3_2
Tc-R-P
PTP-SAK
V-set
DSPc
Interfer-bind
Y_phosphatase3
C2-set_2
PTPlike_phytase
PTP-NADK
Ig_5
Fn3_PTPRU
Insulin_TMD
TMEM154
Egh16-like
ICAM_N
DUF3377
Motif
Other DBs
NCBI-GeneID:
120298978
NCBI-ProteinID:
XP_039179220
LinkDB
All DBs
Position
Unknown
AA seq
1899 aa
AA seq
DB search
MKPNFSISTFVVVAAVLCCLMSSTEADSKPNFMKTPEDQIGISGGVASFVCQATGEPKPR
ITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRVLRDEAIYECMATSSVGEINTSAKLT
VLEENQLPPGFPTIDMGPQLKVVEKARTATMLCAASGNPDPEISWYKDFLPVDIAASNGR
IKQLRSGALQIENSEESDQGKYECVATNSAGTRYSAPANLYVRVRRVSPRFSIPPSNHEV
MPGGSVNLTCVAVGSPMPYVKWIVGDVELTKEDDMPMGRNVLELINITQSANYTCEAMSS
LGVIHATAQITVKALPKPPAEPLVTETTATSVTLTWDSGNADPISYYVIQYKPKSLEGTF
QEVDGVATTRYSIGGLSPFSEYEFRIIAVNNIGRSLPSELVEARTGEQAPSSPPLKVQAR
MLSASTMLVQWEQPEEPNGLIRGYRVYYTTDPHLPLSMWQKHNTDDSHLTTVGSLITETT
YSIRVLAFTSVGDGPPSDVIQVKTQQGVPAQPADFQAEAESDTQIMLTWLPASQERITKY
ELIYWEGTNGIQHKVEFDQTSSYAVDRLKPDTLYKFQLGARSEQGLGVLTPILEARTAQS
TPSAPPQEVACVSISSTTIRVSWVPPPAQSRNGVITQYSVAYQAVEGEDSTKHVVEGIGH
EHSSWEISNLEKWREYKVWVRAHTDVGPGPESIPVSVRTDEDVPSAPPRKVEVESVNSTA
IRVSWKSPISSKQHGQIRGYQVTYVKMENNEPVGPHVIKDVMVAESQLRLKDSADHETII
GGLLPETTYSVSIAAYTTKGDGARSKAKVIATTGAVPGKPTMMISTTSMNTALINWLPPK
EMVGELLGYMLRYKCADEEKMIVIQFGKDDDHYTVTKLYKGATYIFKLSAKNRAGPGEEF
EKEITTPEEAPSGFPQNLEVVGLTTSTTKVTWNPPLLAERNGKIANYTVVYRDINSQQNL
TNVTKEQSITLTNLKSDTTYDIKVRAHTSKGAGPLSPSIQSRTMPMEQVFAKNFRVSAVM
KTSVLLSWEVPDSYKSAVPFKILYNGQTVEVDGHSMKKLINDLVPDTNYSFALTNRGSSA
GALQHRVFIRTAPDVLQTKPVSTYKYIHNGQFTLTLPKVKTSVPVRSYYIVVVSIEHTSS
ILASRVNSPDEMELDQLLEAINQGAAERRQRRQAEHLKPYIAAQVDELPETFVLGDEKNY
NGFFNKPLSEDLSYRCFVLASLEDGDTKKYAASPYSDEIVMEVSPKQQDEPEMLWVMGPV
LAVILIIIIVIAILLFKRKRANSPSSKDEHSIGLKDSLLAHSSDPVEMRRLNYQTPGMRD
HPPIPVTDLADNIDRLKANDGLKFSQEYESIDPGQQFTWENSNLEVNKPKNRYANVIAYD
HSRVILTSIDGVPGSDYINANYIDGYRKQNAYIATQGPLPETLSDFWRMVWEQRTATIVM
MTRLEEKSRVKCDQYWPGRGTETYGLIQVTLLDTVELATYTVRTFALYKNGSSEKRELRQ
FQFMAWPDHGVPEYPTPILAFLRRVKACNPPDAGPVVVHCSAGVGRTGCFIVIDAMLERM
KHEKTVDIYGHVTCMRSQRNYMVQTEDQYIFIHEALLEAATCGNTEVPARNLFAHIQKLS
QVPPGESVTAMELEFKLLANSKAHTSRFISANLPCNKFKNRLVNIMPYELTRVCLQPIRG
VEGSDYINASFVDGYRQQKAYIATQGPLAETTEDFWRMLWEHNSTIVVMLTKLREMGREK
CHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTIRQFQFTDWPEQGV
PKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMRYEGVVDMF
QTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5700 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctaacttcagcatctcaacatttgttgtggtagcagcagttttatgctgcttg
atgtcatcaacagaagcagatagcaaaccaaattttatgaaaactcctgaagatcagatt
gggatttctggtggtgtggcctcctttgtatgccaagcaacaggagagccaaagccacgc
atcacttggatgaagaaaggaaaaaaggtcagctcccagcgatttgaggttattgaattt
gatgatggatctggatcagttctgcggattcaacccctacgtgtccttcgggatgaagca
atttatgagtgcatggctaccagcagtgttggcgagataaacactagtgccaaacttaca
gtattagaagagaatcaacttcctcctggctttccaactatagatatgggcccccagctc
aaggtagtagagaaggcccgcacagctacaatgctttgtgctgccagcggcaaccctgac
cccgaaatctcctggtacaaagatttccttccggtggacatagctgctagcaatggcagg
atcaaacagcttcgttcaggggctctccaaattgaaaacagcgaggaatcggatcaaggc
aaatatgaatgtgtcgctacaaacagtgcaggaacccgttactctgctccagcaaacctt
tatgtgcgagtgcggcgagtatctcctcgattttcaatccctccaagtaaccatgaggtg
atgcctggagggagtgtgaacctcacatgtgtagcagtggggtctccaatgccgtatgtg
aagtggattgttggagatgtggaattaacaaaagaagatgacatgccaatgggcaggaat
gttctagaactgatcaatattacacaatcagccaactatacatgtgaagccatgtcctca
ctgggagtaatccatgcaacagcacagattactgtcaaagctctgccaaagcctccagca
gagccattagtgactgaaacaacagccaccagtgttactctcacctgggactctggaaat
gcagaccccatctcctactatgtcattcaatataagcccaaatctttggagggaacgttc
caagaagtggatggtgtggccaccacccgctatagtattggtggcctaagccccttctca
gaatatgagttccgcattattgctgtaaacaacattggaaggagccttcctagtgaactg
gttgaggcacggacaggagaacaagctccatcaagcccacctctcaaagtgcaggcacgg
atgctgagtgctagcacaatgctggtccagtgggaacaacctgaagagcctaatggattg
attcgaggctaccgggtgtactacacgactgatccccatctaccactcagcatgtggcag
aagcacaacactgatgacagtcatctcaccactgtgggcagtttgataactgagactaca
tatagtattcgtgtcttggcgttcacctcagtaggagatggccccccttctgatgttatt
caagtcaagacccagcagggtgttccagcccaaccagcagacttccaagctgaggccgaa
tcagatacacagatcatgttgacttggctgccagcctctcaagagcgcatcaccaagtat
gagctgatatactgggaaggaacaaatgggatccagcataaggtggaatttgaccagact
tcatcttatgcagttgatcgactcaagccggacacactctacaagtttcaactaggtgcc
cggtctgagcagggtctaggagtccttactccaattttggaagctcgaacagcacagtcc
accccttctgccccaccccaagaggtcgcatgtgtaagcatcagctctaccaccatccgg
gtaagttgggtaccaccaccggctcagagccgcaatggagtcatcacgcaatattccgtc
gcataccaggcagtggaaggagaggacagcaccaagcatgtggttgagggcattggacat
gagcactccagctgggagatcagcaacttggagaaatggagagagtacaaagtgtgggtg
agggctcacacagatgttggtcctggaccagagagcatccctgtctctgttcgcactgat
gaagacgtgcccagtgctcccccacggaaagtcgaggtagagtcagtgaactcaacagca
attcgtgtttcctggaaatcacccatctccagcaaacagcatggccaaattcgaggttac
caagtcacctatgtaaaaatggagaacaatgaaccagttggaccacatgtcatcaaagat
gtcatggtagcggaatcccagttgaggcttaaggactctgctgaccacgaaaccatcata
ggaggccttttaccagaaactacctattctgtcagcatcgcagcctataccactaaaggg
gacggagcccgcagcaaggccaaagtgattgctacaactggagcagtcccaggcaaaccc
actatgatgatcagtacaacatctatgaacaccgccttaatcaattggctcccgcccaaa
gagatggttggagagctcttgggctacatgctgcgatacaaatgtgctgatgaagagaag
atgatagtaatacagtttggaaaagatgacgatcactacactgtgaccaaactttacaag
ggtgccacttatatcttcaaattgtctgcaaagaatagggcaggtcctggggaagagttt
gagaaggaaataactactccagaggaagcaccgagtggcttcccccagaacctggaggtg
gttgggcttaccacctctaccaccaaagtgacctggaatccaccactgctggctgagagg
aatggaaaaattgccaactatacagttgtatacagagacataaacagccagcaaaacctg
accaatgttactaaggaacaaagtatcactctgaccaatctcaaatctgacacaacttac
gacattaaagttagagcccacactagcaagggagcgggacctctcagccccagcattcaa
tcaagaacaatgccaatggaacaagtgttcgcaaagaacttccgtgtcagtgctgtgatg
aaaacctcagtgctacttagttgggaagtgcctgattcttataaatcagcagtacccttc
aagattctatacaatgggcagactgtggaagtagatggacattctatgaagaagctaata
aatgacttggtgccagacacaaattattcctttgcacttacaaaccggggaagtagtgca
ggtgcattgcaacaccgggtcttcatccggacagcacctgatgttctccagacaaagcct
gtttccacctacaaatatatccataatggacagttcaccctcactctccccaaagtgaag
acttctgtgccagtcaggtcatactacattgtggtagtatcaatagagcacacaagcagt
atacttgcttccagagtgaacagtccggatgagatggaactggaccagctacttgaggcc
ataaaccaaggggctgcagaaaggcgccagcgtcgacaagcagaacacctcaagccttac
attgcagcccaagtggatgaactgccagagacatttgttttgggagatgaaaagaattat
aacggcttctttaataagccactttcagaagatttgagctaccgttgttttgtgctggct
tcactggaggatggtgatacgaagaagtatgcagccagtccctattcagatgagattgtg
atggaggtatcaccaaagcagcaagatgaaccagagatgctatgggtgatggggcctgtc
cttgcggtcatcttgattatcattatcgttattgctattctactcttcaaaaggaaaagg
gccaattcaccctcatccaaggatgaacattccattggcctgaaggactccttgctggct
cactcctctgaccctgttgaaatgaggcgacttaactaccaaacaccaggcatgcgtgac
catcctcctattccagtaacagaccttgctgacaatattgacagactgaaagccaatgat
ggactgaaattctcccaggaatatgagtccattgatcctgggcagcagttcacctgggag
aactccaacttggaagtgaacaaaccaaagaatcgctatgcaaatgtgattgcctatgac
cactcccgggtcatcttgacctccattgatggggtccctggaagtgactacatcaatgcc
aattatattgatggctaccgcaaacagaacgcttacattgctacacaagggccactgcct
gagacactcagtgacttctggagaatggtatgggagcaacgtacagcaacaattgtcatg
atgacacgactggaggaaaagtctcgggtgaaatgtgatcagtactggcctggacgtggt
acagagacctatggattgatccaagtgaccttgctagatactgttgaacttgcgacttac
acagtccgaacatttgccctatacaagaatgggtcgagtgaaaaacgggaactgcgacag
tttcagtttatggcttggcctgaccatggtgtgccagaataccctactcctattttagca
tttttaagacgagtgaaagcatgcaatcctcctgatgctggcccagtagttgtacattgc
agtgctggtgtaggcagaacaggctgcttcattgtaattgatgccatgcttgagaggatg
aagcatgaaaagacagtggacatctatgggcatgtgacatgcatgcgctcgcagagaaac
tatatggtgcaaactgaggatcaatatatcttcattcatgaagccttgctagaagcagcc
acttgtggaaacactgaagtgcctgcccgcaatctctttgcccatatccagaaactgagt
caggtacctccaggtgagagtgtcacagcaatggaactggagtttaagctccttgccaat
tccaaagcacatacctcacgattcatcagtgccaatcttccatgcaacaaattcaaaaac
cgcctagtgaatatcatgccctatgagctgacacgggtttgcctgcagccaatccgaggt
gttgaaggctcagattatatcaatgctagctttgtagatggttacagacaacagaaggct
tacatcgccacacagggacctttggctgagaccacagaggatttctggcgaatgctgtgg
gaacacaactccaccattgtagtgatgctaacaaaactgcgagaaatggggcgggaaaaa
tgccatcagtattggccagcagaacgctctgctcggtaccagtattttgtagtggatccc
atggctgaatataacatgcctcaatatatccttcgtgagtttaaggtcactgatgctaga
gatgggcaatcaagaactatccggcaattccagtttaccgactggccagagcagggagta
ccaaaaacaggtgaaggctttattgacttcattggccaagtgcataaaactaaagagcag
tttggccaggatgggcccatcacagtacattgcagtgcgggagtcggacggacaggggtg
ttcatcacattgagtattgtactggagcgtatgcgctatgaaggtgtagttgacatgttc
cagactgtgaagaccctgagaacacagcgaccagccatggtgcagacagaggaccagtat
cagctgtgttatcgggctgctctggagtatcttggcagctttgatcactatgcaacgtaa
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integrated database retrieval system
