Crotalus tigris (Tiger rattlesnake): 120300330
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Entry
120300330 CDS
T08476
Symbol
RB1
Name
(RefSeq) retinoblastoma-associated protein isoform X1
KO
K06618
retinoblastoma-associated protein
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04110
Cell cycle
ctig04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120300330 (RB1)
04218 Cellular senescence
120300330 (RB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ctig01009
]
120300330 (RB1)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctig03000
]
120300330 (RB1)
Protein phosphatases and associated proteins [BR:
ctig01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120300330 (RB1)
Transcription factors [BR:
ctig03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
120300330 (RB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rb_C
RB_A
RB_B
DUF3452
PRMT_C
Motif
Other DBs
NCBI-GeneID:
120300330
NCBI-ProteinID:
XP_039182115
LinkDB
All DBs
Position
Unknown
AA seq
923 aa
AA seq
DB search
MWLEASSMAPTSPPQKMGTGLPSQTEDSSESAGDSEAPAAPQALDRLLFAETDFISLCDA
LHITDNVRIIAWKICEKMDVVENHLKKEMWGICIFMAAVDLDEMTFTFTELLKCLKISVC
KFLHLIKEIDVNMDTISAKMDCTISRLKIKYDTLFALYQKFTRTCEIICIDKPNDQTCAE
ISSCLFIKRCWIMFLLAKGKILQMEDDLVISFQLLLCVFDYCIKQLPLALLKEPYKSVIA
VSANGSSRTSRQSQNRSTRTSKTDTDIKVIEELCKEYDCNMDEVKNVYFTSFIPFLNSMG
ITTFRGLPEVEDMSSKYEEMYLKNKDIDARLFLEKDETLQYENPECLQLDRTPTKNQSED
SPIILPQTPVRAAMSTIQQLMIILNSASDTPSDNLLFYFNNCTVNPHEVIVKRIENMGIT
FKNKFAEAVGQGCAEIGSQRYKIGVRLYYRVMESLLKSEEQRLSVHNFSKLLNNDIFHIS
LLACALELVMATYGTSRNASQSMKIETDLSFPWIINILDLKAFELYMIVESFIKAEPSLT
REMIKHLEGCEHKIMESLAWQSNSPLFELIKQSKDREGQTDEPEPANYFTQPLQHNHSAA
DLYLSPTKSPKKKVSPAFVYSPESQGLGLNQPQKPYKSISLSYFYKKVYCLAYRRLNSLC
LRLLPDHPELEHLIWTLFHHTLQNEYELMKDRHLDQIMMCSMYGICKVKNIDLRFKTIVT
AYKDLNNANQETFKCVLIREGQYDSIIVFYNMVFMQRLKTNILQYASNRPPTLTPIPHIL
QSPYKFSNSPLRVSAGNNIYVSPLKNPSKFSEGLLSPTKMTPRTRILVSIGESFGSSEKF
QKINKMVCNSDRHLKRSAELSTPPKPLKRLRFDIEGQDEADGREHLSGESKFQQKLAEMT
STRTRIQNQKLNDGADASDTVQK
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgtggctggaggcgtcgagcatggcgccgaccagccctccccagaaaatgggaactggc
ctcccaagccagacggaggatagctccgagtccgcgggagactctgaagcgcccgccgcc
ccccaggctcttgacaggcttttgtttgctgaaacagactttatttccttatgtgatgct
ttacacataacagacaatgtgagaataattgcttggaagatctgtgaaaaaatggatgta
gttgagaaccatctaaaaaaagaaatgtggggcatctgcatttttatggctgcagttgat
ctggatgagatgaccttcacttttacagaacttctgaaatgtttaaaaattagtgtatgc
aaatttctgcacttgattaaagaaatagatgtcaacatggatacaattagtgctaaaatg
gactgtactatatcacgtctgaaaataaaatatgatacactatttgcactctatcagaag
tttacaaggacttgtgaaattatctgcattgacaagcccaatgatcaaacttgtgctgaa
ataagttcttgcttatttataaaacgctgctggattatgtttcttttggcaaaaggaaaa
atactgcagatggaagatgatttggttatctctttccagcttctgctgtgtgtttttgat
tattgtatcaaacaattaccccttgcactactgaaagaaccatataaatctgtaattgca
gtatctgctaatggctcatctcgtacaagtagacaaagtcagaatagaagtacaagaaca
tcaaaaactgatacagacatcaaggttattgaagagctctgtaaagaatatgattgtaat
atggatgaggtgaaaaatgtttactttactagctttattccattcctgaattcaatgggt
attacaacattcagaggacttccagaggttgaagatatgtcaagcaaatatgaagaaatg
tatttgaaaaacaaggatattgatgctagattatttctggagaaagacgagactttgcaa
tatgaaaatccagaatgtttacagttagatagaactcctacaaaaaaccaaagtgaagat
tctcctattatacttccacaaacccctgttcgagctgcaatgagtactattcagcagtta
atgataatattaaactctgcaagtgatactccttcagacaaccttctcttctattttaat
aactgcacagttaatcctcatgaagtaatagtgaaaagaatagaaaatatgggtattacc
ttcaagaacaaatttgctgaagcagttggacaaggctgtgctgaaattggatctcagaga
tacaaaattggagtaaggttatactatagagtgatggaatccttattaaagtcggaagaa
caacgtctgtcagttcataattttagcaaactcttgaacaatgacatcttccacatctct
ctgctggcttgtgctcttgagctagtcatggctacatatggcacttcaagaaatgcttca
cagagcatgaagatagagacagacttgtcttttccatggatcatcaacatcctggatttg
aaagcctttgaattatacatgattgttgaaagcttcattaaagcagaaccaagcttgacc
agagagatgataaaacacctggagggctgtgaacacaaaattatggaatcccttgcatgg
caatcaaattcaccattatttgaactgataaagcagtccaaagaccgagaggggcagact
gatgagcctgaacctgccaactattttactcaacctcttcaacataatcacagtgctgca
gatttgtacctctctcccacaaaatctcctaagaaaaaagtttctcccgcttttgtatat
tctccagagtcgcagggtttggggctaaatcagcctcagaaaccttataaatctatttct
ttgtcatatttctataaaaaagtgtactgcttggcttatagacgattaaatagcctatgt
ttgcgtcttctgcctgaccatcctgaacttgaacatttgatatggaccctttttcatcac
acactgcaaaatgaatatgaactgatgaaagacagacacttagaccagattatgatgtgt
tctatgtatggcatatgtaaggtgaagaatattgatctcaggtttaaaacgattgtgaca
gcatacaaggatctcaacaatgcaaatcaagagacattcaagtgtgttttaatcagggaa
ggacaatacgattccattatagtcttctacaacatggtatttatgcaaagactgaaaact
aatattttgcaatatgcttccaataggcctccaacattaacacccattcctcacattcta
cagagcccttataagttttctaattctcctttacgtgtttctgctggaaataatatctat
gtctcacctttgaagaatcccagcaaattttctgaagggctattgtcacccacaaaaatg
acacccagaacaagaatattggtttcaattggtgaatcctttgggagttctgaaaagttt
caaaagataaacaagatggtatgtaacagtgatcgtcatctcaaacggagcgctgaacta
agcacccctcctaagcctttgaagagattgcgttttgatattgaaggtcaggatgaagct
gatggaagggaacatctttctggagagtcaaaattccaacaaaagcttgcagaaatgaca
tctactcggactagaatacaaaaccagaaactgaatgacggtgctgacgcttcagacacc
gtacagaagtga
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