Crotalus tigris (Tiger rattlesnake): 120302663
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Entry
120302663 CDS
T08476
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120302663 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ctig03041
]
120302663 (EFTUD2)
Spliceosome [BR:
ctig03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
120302663 (EFTUD2)
Complex C
U5 SnRNP specific factors
120302663 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
FANCL_d3
Motif
Other DBs
NCBI-GeneID:
120302663
NCBI-ProteinID:
XP_039187381
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDDDDDEMGRESKDLDEPDDDDDDDDMGDHDEDHPGMDVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLVEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTIVLPDTKGKSFLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFASSQYSICFTLGSFAKIYADMYGDINYQEFAKRLWGDIYFNTKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKIGAKTKIEHTYTGGVDSDLGESMSECDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAEQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATVTEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKTLLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggatacagacttgtatgatgaatttggaaattatattggtccagaacttgattctgat
gatgacgatgatgaaatgggtcgtgagtcaaaagatcttgatgagcctgatgatgatgat
gacgacgatgatatgggagaccatgatgaagatcaccctgggatggatgtagtgttgcat
gaggataaaaaatattatccaacagctgaggaggtatatggtccagaagtagaaactata
gtgcaggaagaagatacacagcctcttacagaacctattattaaaccagtgaagaccaag
aaattttccctcatggagcaaacattgccagttactgtatatgaaatggattttcttgca
gatctgatggacaactcagaattgatccggaatgttacactttgtggacacctacaccat
ggcaagacttgttttgtggattgcctggtcgaacagacacatcctgagatcaggaagcga
tacgaccaggatctttgctatacagatattctattcactgagcaagagaggggtgttggg
attaaaagcacaccagtgaccattgtcctcccagacaccaaggggaaatcttttctcttc
aatatcatggatactcctggccatgtaaacttctctgatgaggtcacagcaggccttcgc
atttctgatggtgtggtacttttcattgatgcagctgagggggtcatgctcaacactgag
cggttaatcaagcatgcagtgcaggaaagattggcagtgacagtgtgtattaacaagatt
gaccggctgatattagaactgaagctgccacctactgatgcctattataagctgcggcac
atagtggatgaagtcaatgggttaatcagcatgtattccacagatgaaaacctgatcctt
tcacctcttttgggcaatgtctgttttgccagctctcagtatagcatttgtttcacattg
ggttcctttgccaagatatatgctgacatgtatggagacatcaattaccaggagtttgct
aagcgactgtggggagatatctatttcaataccaagacgagaaaatttactaaaaaagcg
ccaacaagtagttcccagcgaagctttgtggaatttattcttgagcctctttacaaaata
ctggcccaggtagttggagatgtagataccaccttgcctcgaactttggatgaactggga
attcatctgaccaaggaagagttgaaattaaatatccgccccctcttgaggcttgtgtgc
aagaaattttttggagagttcacaggttttgtggatatgtgtgtgcagcacatcccctcc
cctaaaataggggcaaagaccaagattgagcatacttatacaggtggagttgactctgat
ctaggagagtccatgagtgaatgtgaccctgatggtccacttatgtgccacaccacaaaa
atgtatagtacggacgatggagtccagttccatgcatttggcagggtgttaagtggaacc
atccatgcagagcaacctgtcaaggtacttggagaaaactacactctagaagatgaagaa
gattcacagatttgcactgtggggcgcctttggatctctgtagcaaggtaccatatagaa
gtaaatagagtgccagctggtaactgggtgcttattgagggagtagaccagcctattgtg
aagacagccactgtcactgagcccaggggtaatgaagaggctcaaatattccgtcccttg
aagttcaacaccacatctgtgatcaaaatagctgtggagcctgtaaatccatctgagctg
cccaaaatgttggatggcctgcggaaagtcaataagagctatccctctctcactaccaag
gtggaagaatctggggaacatgtgatcttgggaacaggagaactttatcttgactgtgta
atgcatgatcttcggaaaatgtattcagagattgatatcaaggtagctgatcctgtggtc
acattctgtgagacagttgtggaaacatcttccctgaagtgttttgctgagacacccaat
aagaaaaacaagattacaatgattgctgagcctctagaaaagggcctggctgaagacatt
gagaatgaagttgtgcagataacatggaacaggaaaaagctgggtgagtttttccagaca
aaatatgactgggatttgttggctgctcgttctatctgggcctttggaccagatgctact
ggaccaaacatcttggtggatgataccttaccctcagaggttgacaaaaccctcttaggt
tctgtgaaggacagtattgtgcaaggcttccagtgggggacaagggaagggcccctgtgt
gatgaattgatccgcaatgtgaaatttaagatcttggatgctgttattgctcaggaacca
ttacatcggggaggtggacagatcattccaacagcccgtcgggttgtgtattctgccttt
ctcatggccacgccacggctaatggagccatactatttcgtagaggtccaggctcctgct
gactgtgtctctgcagtgtacactgtcctggccaggcgtagaggccatgtgacccaggat
gcaccaatcccaggatcccctctctatactatcaaagcctttatcccagctatcgactca
tttggatttgagacagacctcaggacacatacccagggacaagcattctcactctctgtt
tttcaccactggcaaattgtgccaggtgatcccctggacaagagcattgtgatcagacct
cttgaaccacagccagcccctcacctggccagagaatttatgatcaaaactagacgcagg
aagggtctaagtgaggatgtgagcatcagcaagttcttcgatgaccctatgttgctggaa
ttggccaaacaggatgtggtactgaactatcccatgtga
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integrated database retrieval system
