Crotalus tigris (Tiger rattlesnake): 120305085
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Entry
120305085 CDS
T08476
Symbol
LDLR
Name
(RefSeq) low-density lipoprotein receptor
KO
K12473
low-density lipoprotein receptor
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03272
Virion - Hepatitis viruses
ctig04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
120305085 (LDLR)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120305085 (LDLR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ctig04131
]
120305085 (LDLR)
Membrane trafficking [BR:
ctig04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
120305085 (LDLR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
SGL
EGF_CA
EGF
EGF_3
hEGF
Psg1
NBP1
Motif
Other DBs
NCBI-GeneID:
120305085
NCBI-ProteinID:
XP_039192380
LinkDB
All DBs
Position
Unknown
AA seq
905 aa
AA seq
DB search
MVSAWHLSGFCVFVYQSFGPPGRSRSRAEKGGQTMSPGGLETSLFALMLLGTLSRVSTNE
RGKCGRNEFQCRNGDCIPYKWICDGKPECQDGSDESLDACKSVTCSSTQFSCGGRINRCI
DMSWRCDSEVDCENDSDEDNCPPKRCADDQFQCQNGNCIAFDFVCDEDDDCGDSSDELNC
RAPTCNPEMFHCNSSECIPKFWVCDNEADCKDGSDESAEFCGIQQGAKKTNPCSPLEFHC
GSGVCIHQRWQCDGSFDCKDRSDEANCVKATCRPDEFQCNDGMCIHGSLQCNQEPDCKDL
SDEVGCINVTPCKGSNVFKCSSGECISMDKVCNGLKDCRDWSDEPLKECRTNECLANKGG
CSHICNDLKIGYECLCPEGFQLIDQRKCEDIDECLNPDACSQVCVNLKGSYKCECKEGYQ
IDPTTKACKAIGTIAYLFFTNRHEVRKMTLDRSEYTNLIPHLKEAMALDMEINNNKIYWS
DSFHKKIYSTPIDKAGNHSHHTTVISSGIKVPDGLAVDWVHRNIYWTDSGLGTISVASSE
GLKRKTLIKEVDAKPRAIVVDPVHGFMYWTDWGMSAKIAKSGLNGVDSFPLVKEGIQWPN
GIALDLITHRLYWVDSKYHSVFSIDVNGENRRTILMDEEMLAHPFGIAVFEDKVFWTDVF
NEAIFSANRRTGSDIVKVADNLFSPDDLTLFHSVRQPKGTNWCEKNGISNGGCQYLCLPA
PQITLHSAKYTCVCPDDMYLDTDMRSCSQDPVTPNIPAVAATTMLSAKISPTAWLLSTSR
TPTQRTEHLPADVLNNVDTNIPEHTTHEMVTLSQQVQNGIAVETDGTERRGPSALAIVLP
LALISLISFGTFLIWKNWRLKNINSINFDNPVYQKTTEDEIHICRSQEGYTYPSRQMVSL
EDDAA
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggtgagtgcctggcacctgtccggattctgcgtttttgtgtaccaatcctttgggcca
cccggacgcagccgaagcagagcagagaaaggagggcaaaccatgagcccaggtggattg
gaaacttcactgtttgccttgatgctgttgggtactctcagccgagtctccacaaatgag
cggggtaagtgtggaagaaatgaatttcaatgcagaaatggagattgcatcccttacaaa
tggatctgcgatggcaagcctgaatgtcaggatggttctgatgaatccctggatgcctgc
aagtctgtgacttgcagttcaacccagttcagctgtggcggtcgcatcaatcgctgtatt
gatatgtcctggcggtgtgactccgaagtggattgtgaaaatgactcagatgaagacaac
tgccctcctaaacgttgtgcagatgatcagttccaatgccaaaatgggaattgtattgct
tttgattttgtctgtgatgaagatgatgactgtggagatagcagtgatgaattaaactgt
cgtgccccaacctgcaatcctgaaatgtttcattgcaacagctcagagtgcattcccaag
ttctgggtctgcgacaatgaagcagactgtaaagatggatctgatgaatcagccgagttc
tgtggaatccagcagggagccaagaaaaccaatccatgctctccattggagttccattgt
gggagtggtgtgtgcatccaccagcgctggcagtgtgacggaagctttgactgtaaggac
agatcagatgaggcaaactgtgttaaagcaacctgccgacctgatgaatttcagtgcaat
gacgggatgtgcatccatgggagcttgcaatgcaaccaagagcctgactgcaaggacctg
agtgatgaggttggctgtatcaatgtgacaccttgcaagggatcaaatgtatttaagtgc
agctctggagaatgtatcagcatggacaaggtctgcaatggattgaaagactgcagggat
tggtcagacgaacctcttaaggagtgccgaactaatgaatgtttggctaataaggggggt
tgttcccatatatgtaatgacctcaaaattggatatgaatgtttatgccctgaaggcttc
cagctgattgaccaaagaaaatgtgaagatattgatgagtgtctcaaccctgatgcctgt
agtcaagtctgtgtgaacctgaaaggaagctataaatgtgaatgtaaagaaggatatcag
attgatccaactaccaaagcttgcaaagcaattggcaccattgcttacctcttttttacc
aatcgtcatgaggtcagaaaaatgacattggaccgcagcgagtacacaaatctgatcccc
catcttaaagaagcaatggccttagatatggaaatcaacaataataaaatctactggtcc
gacagctttcacaagaaaatatacagtaccccaattgataaggctggcaaccattcccac
cataccactgtgattagtagtggcatcaaagttccagatggccttgctgttgactgggtg
catcgcaatatttactggactgactcaggcctaggcaccatctctgtggccagcagtgaa
ggcttgaagaggaagactctgatcaaggaagtcgatgccaaaccacgggccattgtggtg
gatccagtccatgggttcatgtactggactgactgggggatgtctgctaaaattgccaaa
agtggtctgaatggagtggacagtttccccttggtgaaagaaggcattcaatggcctaat
ggaatagcattagatctgattacccatcgcctttattgggtagactccaaatatcattcg
gtctttagtattgatgtgaatggggaaaacagaagaactatccttatggatgaagagatg
ttggctcacccttttggcatcgcagtatttgaggataaagtattctggacagatgtcttc
aatgaagccatctttagtgccaaccgccgaaccggctcagatattgtcaaagtggcagac
aatctcttttcaccggatgatttgacactgtttcattctgtgcggcaaccaaaaggtaca
aattggtgtgagaagaatggcatttccaatggaggctgccagtacctctgccttcccgct
ccccaaatcactctccactctgccaagtacacctgtgtctgtcctgatgacatgtacctg
gacaccgacatgagaagctgctcccaagatcctgttacacccaatatcccagctgtggct
gctacaacaatgctgtctgctaagatctcgcctacagcatggctactatctacaagtagg
actccaacccagagaactgagcatctgcctgcagatgtgctgaataatgttgataccaac
atcccagaacatacaactcatgagatggtcactctgtcccagcaagttcaaaatggcata
gctgtagaaacagatgggacagaacggaggggtccatcagcactagctatcgttctacct
ctggcactgattagtttaatctcttttgggacttttcttatttggaagaactggcgtctc
aagaacatcaacagtatcaattttgataaccccgtttatcagaagacaactgaggatgaa
attcatatctgtcggagccaggaaggatatacatacccatcaagacaaatggtcagtcta
gaagatgatgcagcatga
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