Crotalus tigris (Tiger rattlesnake): 120306869
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Entry
120306869 CDS
T08476
Symbol
PDGFRB
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04010
MAPK signaling pathway
ctig04020
Calcium signaling pathway
ctig04510
Focal adhesion
ctig04540
Gap junction
ctig04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120306869 (PDGFRB)
04020 Calcium signaling pathway
120306869 (PDGFRB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120306869 (PDGFRB)
04540 Gap junction
120306869 (PDGFRB)
09142 Cell motility
04810 Regulation of actin cytoskeleton
120306869 (PDGFRB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ctig01001
]
120306869 (PDGFRB)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ctig04090
]
120306869 (PDGFRB)
Enzymes [BR:
ctig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
120306869 (PDGFRB)
Protein kinases [BR:
ctig01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
120306869 (PDGFRB)
CD molecules [BR:
ctig04090
]
Proteins
120306869 (PDGFRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
C2-set_2
VEGFR1-3_N_Ig-like
VEGFR-1-like_Ig-like
V-set
Motif
Other DBs
NCBI-GeneID:
120306869
NCBI-ProteinID:
XP_039196809
LinkDB
All DBs
Position
Unknown
AA seq
1073 aa
AA seq
DB search
MPAFFQKMLVFLVLFLTSVKEISSLEITPSAHEVVLNLYTDFTLKCSGHNEVLWKTDNKH
TKLDTVLEKRGTIFFNTLTLRNLTGLNTGEYSCADNQVLDEKAIYIFVPDLSMPFLPSTQ
EDTFVFSTGYDEVIIPCRVTNPNATVALYEKRVNDPVPGMYFPQQGFKGQFEDKTYICKA
TIEDEEFESETFYVYNLQVSSSPTSLINISISAVQTILKQGENIIVTCTVRGIELIRYTW
SYPGQMVGKEVKPATIIVPGHYTSSILTIHNADSNDQGLYACEATDTYHGQKEEQSIFIR
VIERGFVTFHTVLNETVFAELHKSHTFLVQIEAYPSPTIIWFQNKKPLTSESNSDFAINS
RNLSETRYQTTLTLVRVKASEGGLYTVRAFHEDDLKELSFYLQINVPATVTELKDSSNKT
NGEQTVICTTEGMPQPEVTWYTCNNDKWCTGETTKILGNSSEEMNLQTNFTYEDDRKVYI
VTSKLHFHRVDEPIFIQCAAQNLLGAHSQQITLVPYNLPFKVIIISVIVAFVVLMVLFLV
ILIFLWRKKPRYEIRWKVIESISSDGHEYIYVDPMQLPYDSSWEIPRDRLVLGRTLGSGA
FGRVVEAIAHSLSHSQSTMRVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGA
CTKGGPIYIVTEYCRYGDLVDYLHRNKHTFLQCYSEKAKQEAELYGNGMRVDRLQSHTSI
SVESDGGYMDMSKDESLDYVPMSDMKGEIKYVDIDSSNYGTTYELDSYSPSGSEKVTLIS
ESPLLSYIDLVGVSFQVAKGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMR
DSNYISKGNTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQF
YNAIKRGYRMSKPTHASNEIYEIMQKCWEEKFEIRPSFFQLVVLMGNLLTDSYKKKYQQV
NEEFLKSDHPAIVRIRPRNTGFSASRSTASDSVSSSSVLYAAVEQNGVDNDYIIPLPDLK
PEADSNNPPEASSSRASSTLNEANTSSTISCDSPLGPEQEEEEEQASELKPDC
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctttctttcagaagatgctagtcttcttggtcctctttctcacaagtgtgaaa
gaaatcagctccctggaaatcactcccagtgcccacgaagttgtcctcaatctctacact
gattttactctgaaatgttcaggccacaatgaggttttatggaaaacagacaacaagcat
accaaactagacactgtcctggagaaaaggggcaccattttttttaacaccctcacatta
aggaacttgactggtttaaacacaggtgaatattcctgtgccgacaatcaagtcctggat
gaaaaggccatctacatttttgtaccagatctctccatgcctttcctaccaagcacccaa
gaagacacgtttgtgttcagcacaggctacgatgaagtcattattccttgccgtgtgaca
aatcccaatgctacagtagctctttatgaaaagagggttaatgatccagtccctggaatg
tattttccacagcaaggctttaaaggccagttcgaagacaagacctacatctgcaaggca
acaatagaagatgaagagtttgaatctgaaacattctatgtctacaacctccaagtttct
tcttctcctacatccttaatcaacatttctatcagtgcagtgcaaactattttgaaacaa
ggcgaaaatatcattgtgacatgtacagtaagaggtattgaattgattcgttatacctgg
agttatcctggacaaatggtaggcaaagaggtaaaacctgcgacaattattgttccagga
cattatactagttctatcctaaccattcataatgcagactcaaatgatcagggtctatat
gcatgtgaggccacggacacctatcatggacagaaagaagaacaaagtatctttatcaga
gtgattgagcgtggcttcgtgactttccacactgtactgaatgagaccgtatttgcagaa
ctgcacaaaagtcacacctttttggtacagatcgaagcctatccaagtccaaccatcatc
tggtttcagaataagaagcccctgacttctgagagcaacagtgattttgctatcaatagc
aggaatttgtcagaaaccaggtatcaaactactctgacccttgtgagggtgaaagcaagt
gagggaggtctgtacactgtccgagcatttcacgaagatgacttaaaagagctctccttc
tatttgcagattaatgtcccagctacagtgactgaactgaaagacagtagcaacaaaaca
aatggtgagcaaacagtgatctgtactacagaaggaatgccccaaccagaggttacctgg
tatacctgtaataatgacaaatggtgtactggggaaactaccaagatcctggggaatagc
tcagaagaaatgaatctgcaaacaaatttcacatatgaagatgaccggaaagtttacatt
gtgacaagcaagctccactttcacagagtagatgagcctatttttatccaatgtgcagct
caaaatctcttgggtgcacactctcagcagatcaccctagtcccatacaatctacctttt
aaagtgatcattatttcagtaatcgtggcctttgtggttctcatggttcttttcctggtg
atcctcattttcttgtggcgaaaaaagcctcgatatgaaattcgctggaaggtaattgag
tcaatcagctcagatgggcatgaatatatctacgtggaccctatgcaactgccttatgat
tccagctgggaaattccaagggacaggctggttttagggcgtacattgggctctggagcc
tttgggcgtgtggtggaagcaattgctcacagcctcagccattcccagtccaccatgaga
gttgctgtgaaaatgctcaagtccacagcccgaagcagtgaaaagcaggctctgatgtca
gaactgaagatcatgagccaccttgggcctcacctgaacattgtgaacttgcttggtgct
tgcaccaaaggaggtcccatctacatcgtaactgaatactgtcgctatggagacctggtg
gactatctacataggaacaagcacaccttcctgcagtgctatagtgagaaggccaagcaa
gaagcagaattgtatgggaatggcatgcgtgtggaccggctgcagagccatacatccata
tctgtagaaagtgatgggggctacatggacatgagtaaggatgaatcactggattatgtg
cccatgtctgacatgaagggtgaaatcaaatatgtagacattgattcttccaattatggc
acaacctatgagctggacagctattcaccatcaggttcagaaaaagtgaccttgatcagc
gagtctcctctcctcagttatattgatcttgttggagttagtttccaagtggctaaggga
atggagttcttagcttctaaaaactgtgtgcaccgtgatctggctgcaagaaacgtactg
atctgcgaagggaaactggtgaaaatctgtgacttcggcttagcgagggacatcatgcgg
gattccaattatatttccaaagggaataccttcttgcctttgaaatggatggcccctgag
agcatcttcaataacctctacactaccttaagtgatgtgtggtcttttgggattcttcta
tgggaaatattcactctaggtgggactccatatcctgaactgcctatgaacgagcaattc
tataatgctattaaacgtggctaccggatgtccaaacctacccatgcatccaatgaaatc
tatgaaattatgcagaaatgctgggaagagaagtttgagatccgaccgtctttctttcaa
ctggtagtgcttatggggaacctgctaacagacagctacaagaagaagtatcaacaagtc
aatgaagaattcttgaaaagtgatcacccggctattgtgcgtatcaggcccaggaataca
ggattcagtgcttctaggtccactgcaagtgacagtgtcagttcaagttcggtcctctat
gcagctgtggaacagaatggagtggacaatgattatatcattcctttgcctgatcttaaa
ccagaggcagacagtaataatcctccggaggcctctagcagcagagcaagttcaaccctg
aatgaagcaaacacatcatcgactatatcttgtgacagtcctttaggccctgagcaagaa
gaagaagaagaacaagcatctgagttaaagccagattgctag
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integrated database retrieval system
