Crotalus tigris (Tiger rattlesnake): 120306959
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Entry
120306959 CDS
T08476
Symbol
KDM2A
Name
(RefSeq) lysine-specific demethylase 2A isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120306959 (KDM2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctig03000
]
120306959 (KDM2A)
04121 Ubiquitin system [BR:
ctig04121
]
120306959 (KDM2A)
03036 Chromosome and associated proteins [BR:
ctig03036
]
120306959 (KDM2A)
Enzymes [BR:
ctig01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
120306959 (KDM2A)
Transcription factors [BR:
ctig03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
120306959 (KDM2A)
Ubiquitin system [BR:
ctig04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
120306959 (KDM2A)
Chromosome and associated proteins [BR:
ctig03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
120306959 (KDM2A)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
120306959 (KDM2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
JmjC
Cupin_8
Cupin_1
Motif
Other DBs
NCBI-GeneID:
120306959
NCBI-ProteinID:
XP_039196991
LinkDB
All DBs
Position
Unknown
AA seq
1199 aa
AA seq
DB search
MAAAAASIKGQRKIRALEEQEEDSSSDISFSLSSEESEMEPEEERIRYSKRLRGAMRRRY
EDDGISDDEIEGKRTFDLEEKLSTSKFNANFVVFMEGKDFTAEYIQRGGLRDPLIFKNCD
GLGIKMPEPDFSVGDVRLYVGSRRMVDVMDVNTQRDIEMTMAQWARYYETPEEEREKLYN
VISLEFSHTRLENLVQRPTTVDLIDWVDNMWPRHLKESQTESTNAILDMQYPKVQKYCLM
SVKGCYTDFHVDFGGTSVWYHIHRGGKVFWLIPPTPQNLELYENWLLSGKQGDIFLGDRV
SDCQRIELKQGYTFVIPSGWIHAVYTPTDTLVFGGNFLHSFNIPMQLRIYSIEDRTRVPV
KFRYPFYYEMCWYVLERYVYCITNRSHLTKDFQKESLNMDMELCNSESGNVDEDDAMGGK
ESRRPVTRRSILTSPVANGANLDYDELSKGCRSLPSLKRTLSMDSESSRGSQNGQTWDSH
SNCSHKDKKVHLTQFELEGLRCLVDKLESLPLHKKCVPTGIEDEDALIADVKLLLEEYSN
SDPKLALSGIPIVQWPKRDKLKLQTRPKLRLPAIPITKPHTMKPAPRPATVRPTVSPIVS
GARRRRVRCRKCKACLQGECGMCHYCRDMKKFGGPGRMKQSCILRQCLAPRLPHSVTCAL
CGEVDKNEDSQEFDKKLMECCICNEIVHPGCLQMDGEGLLNEELPNCWECPKCYKGDEAE
KGQKRKMDDGDDDTVQAKVLRPLRSCEEPLTPPPHSPTPMLQLIHDPVSPRSIVTRSSPG
AGPSDHHGASRDERFKRRQMLRLQGTERTVVREKENNPSGKKELSEVEKAKLHGSYLTVT
LQRPTKDVHGTSIVPKLQAITPSSNLRHSPRVVMRQSSARTPQRGGDEEAAEEEEEDESA
DEEEENAEENGAARLNGQGGRASDSEEIWMQKEVWMSVFRYLTRKELCECMRVCKTWYKW
CGDRRLWTKIDLSRYKSITPMALGGIIRRQPVSLDLSWTNISRKQLTWLINRLPGLKDLI
LAGCSWSAVSALSTSTCPLLRTLDLRWAVGIKDPQIRDLLTPPSDKPSQDNRSKLRNMID
FRLAGLDITDATLRLIIRHMPALSRLDLGHCNHLTDQSTNLLTAVGSSTRNSLTEINMAG
CNKLTDQSLLYLRRISNVTLIDLRGCKQITRKACEHFISDLSINSLYCLSDEKLIQKIS
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggctgctgcttctataaaggggcaaaggaaaatcagagccctggaggaacag
gaagaagatagtagttctgatatatccttctcactctcatcagaagagtctgagatggaa
cctgaagaagaacggatccgttatagcaaacgactgcgtggtgctatgagacgacgctat
gaggatgatggtatctcagatgatgaaattgaaggcaagcgaacatttgatcttgaagaa
aaactttctaccagcaaatttaatgctaactttgtagtgttcatggaaggcaaagacttc
actgcggagtacattcagcgtggtggcttaagagatcctttgatcttcaagaattgcgat
ggtcttggaataaagatgccagagccagactttagtgtgggtgatgtacgactctacgta
gggagtcgtaggatggtggatgtcatggatgtaaacacacaaagggatattgagatgacc
atggctcagtgggcacgctactatgaaacaccagaggaagagcgagagaagctatacaat
gttatcagcttagagttcagccatacccggcttgagaatctggtgcaaaggccaactacg
gtggatttaattgattgggttgacaatatgtggccaaggcatctgaaggaaagccagaca
gaatcaacaaatgctattttggatatgcagtatccaaaagtgcaaaaatattgcctgatg
agcgttaaaggatgttatacagatttccatgtagattttggtggcacatcagtatggtat
cacatccacagaggggggaaggtcttctggctaatcccacccactccgcagaacttagaa
ttatatgaaaactggctactatcagggaaacaaggtgacatcttccttggtgacagggta
tcagattgtcagcgtattgaactaaagcaaggctatacctttgtcattccttcaggttgg
atccatgctgtgtatactcctacggataccctagtttttggaggaaactttctacacagc
ttcaacatccctatgcagctacgaatctatagcattgaagaccgtacacgggtcccagtt
aaatttcgttatcccttttattatgaaatgtgctggtatgtactagaacgctatgtctac
tgcatcactaaccgttcccacttgaccaaggactttcagaaggaatcacttaacatggat
atggaactgtgtaactcagagtcaggaaatgtggatgaagacgatgctatgggcggaaag
gaatcacgtcgtccagtcactagacggtcaatccttaccagcccagtagccaatggtgct
aatctagactatgatgaactaagtaaagggtgtcgaagtttgccaagtcttaagagaacc
ctctccatggattctgaatccagtcgaggttcccagaatggccaaacgtgggattctcac
agcaattgttcacataaagacaagaaggtgcacctaacacagtttgagcttgaaggtctg
cgttgtcttgtagacaagctggaatctttgcctctacacaagaagtgtgtacccacaggc
atagaagatgaggatgctcttattgcagatgttaagctattgcttgaagagtattcaaac
agtgatcccaaactggcacttagtggaatccctattgtccagtggccgaagagggataag
ctcaagcttcagactcggccaaaattacgattacctgccatccctatcaccaagccccat
accatgaaaccagctccacgacctgcaactgtgagacccacagtctctcctatagtatct
ggtgcacgaagaaggcgggtgcgatgtcgtaaatgcaaggcctgcctgcagggtgaatgt
ggcatgtgtcattactgcagagatatgaagaaatttggagggcctggtcgcatgaaacag
tcttgtattttaaggcaatgtttggcgcccagactgcctcattctgtcacatgcgcactt
tgtggagaggtagataagaatgaagattcccaggagtttgacaagaaactaatggagtgc
tgcatctgcaatgaaattgttcatcctggctgtttacagatggatggggaagggctactg
aacgaggaattgccaaattgctgggaatgcccaaagtgttataagggagatgaggcagag
aaaggccagaaacggaaaatggatgatggtgatgatgacacagttcaagccaaagtcttg
cgtcccttgcgtagctgtgaggaacctctgactccaccaccccactctcctaccccaatg
ttgcagctgatccatgatcctgtgtcacctcgaagcatagtgacgcggtcctctccaggg
gcaggtcctagtgaccatcatggtgccagtcgggatgaacgctttaagagacgacagatg
cttcgactacagggcacagaacgtacagttgtgcgggaaaaggaaaacaaccctagtggc
aagaaagagctttcagaggttgaaaaagccaagcttcatggttcatatctcacagtcaca
ttgcaaagacctaccaaagacgtgcatggcacttcaattgtacccaagttgcaggctatc
actccctccagtaatctgagacactccccccgtgtggtcatgcgccaaagttcagccagg
acaccccagcggggtggagatgaagaagcagcagaggaggaagaggaagatgaaagtgca
gatgaagaagaagagaatgctgaggaaaatggggcagccaggctaaacggacaggggggc
agggcatcagatagtgaggaaatctggatgcaaaaggaagtgtggatgtctgtcttccga
taccttactcgcaaggagctttgtgaatgtatgcgtgtatgcaaaacctggtacaaatgg
tgcggtgataggagattgtggacaaagattgacttaagcagatacaaatccatcacaccc
atggctcttggtggtataatcaggaggcaaccagtcagccttgacctcagctggaccaat
atttctagaaaacagcttacctggctcatcaacagattaccaggcctcaaagacctcatc
ttggcaggctgctcctggtcagcagtgtctgctctcagtacctctacctgcccccttctc
aggaccctcgatcttcggtgggcagtaggaatcaaggatcctcagattcgggacttgctg
acacctccatcagataaacccagtcaagacaatcgcagcaaactccgtaacatgatagac
ttccgattggccgggctggatattactgatgccacactccggctcatcattcgccacatg
cctgcgctctcacgacttgatcttggtcactgcaatcaccttacagaccagtcaaccaac
ctgttaacagctgttggatcttccacacgaaactcactcactgaaattaatatggcaggt
tgcaataagctcacagaccagtccctgctgtacctgcgacgcatctctaatgtcactctg
atagatctgcgtggctgcaaacagatcacccgtaaggcctgcgagcacttcatttcagac
ctgtcaatcaacagcctctattgcctgtcagatgaaaagctgatccaaaaaatcagctag
DBGET
integrated database retrieval system
