Crotalus tigris (Tiger rattlesnake): 120307674 Help Entry 120307674         CDS       T08476                                  Symbol THBS1 Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism ctig  Crotalus tigris (Tiger rattlesnake) Pathway ctig04115   p53 signaling pathway ctig04145   Phagosome ctig04148   Efferocytosis ctig04350   TGF-beta signaling pathway ctig04510   Focal adhesion ctig04512   ECM-receptor interaction ctig04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:ctig00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     120307674 (THBS1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     120307674 (THBS1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     120307674 (THBS1)    04148 Efferocytosis     120307674 (THBS1)   09143 Cell growth and death    04115 p53 signaling pathway     120307674 (THBS1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     120307674 (THBS1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     120307674 (THBS1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ctig04131]     120307674 (THBS1)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:ctig00536]     120307674 (THBS1) Membrane trafficking [BR:ctig04131]  Endocytosis   Phagocytosis    Opsonins     120307674 (THBS1) Glycosaminoglycan binding proteins [BR:ctig00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    120307674 (THBS1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC CFP_C_TSP1 EGF_3 TSP1_ADAMTS EGF TSP1_CCN cEGF Motif Other DBs NCBI-GeneID:  120307674 NCBI-ProteinID:  XP_039198601 LinkDB All DBs Position Unknown AA seq 1166 aa AA seqDB search MELSGGLFLLLMLGVCTTNRIPETSDDNSVFDLFELIGLGRKRAHKGSGVHPVKGLELSS PAYRIDDATRIPAVSDHKFQDILYSIQAEKGFVLLANLRPIKKDAGTILAVERKDNSGYV FKLVLNGKAKTLDLSVFPEEGNQSLVSVEEVKLPIARWSSITLFVQEDQAQLYVGCDKMT NVELEIPIQDIFTRDLSNSARLRIAKGGVNDNFQGMLQNVRFVFGTTLETILRNKGCQSS TGTLIKLDNPMNGSRPAIRTNYIGQKTKDICGFSCDDLTKMFIELQSLRALVTKVENSVN HMELIAPHNIKKGICLHNNVVYENAAEWTTDTCTTCTCQNSAVMCHKVSCPLMPCSNATV PDGECCPRCWPSDSADDAWSPWSEWTTCSTTCGNGIQQRGRSCDRINHLCEGSSVQTRIC NMQECDKRFRQNGAWSHWSPWSSCSVTCGTGLITRIRLCNSPLPQMGGKTCEGEARENMP CQKSPCPINGNWGPWSPWDACPITCGGGIQKRSRLCNNPEPKFEGKDCIGDATATQMCNK QDCPIDGCLSNPCFAGTKCTSFPDGSWKCGPCPVGYQGNGIRCKDIDECQEVPDACFVLS GVHRCENTVPGYHCLPCPSRFTGTQPFGRGVEDAIAKKQVCKPRNPCADGTHNCNKYAKC IYLGHFSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLHCVANATYHCTKDNCPNLPN SGQEDYDDDGIGDACDDDDDNDKIPDDRDNCPFNYNPQQYDYDRDDVGDRCDNCPYNHNP LQIDTDQNGEGDACAVDIDGDGILNERDNCQYVYNVEQTDLDLDGVGDQCDNCPLAHNPD QMDSDSDRIGDKCDDNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDACDHDDDNDGV PDDRDNCRLVPNPDQADSDGDGRGDACKDDFDNDNVNDIDDVCPENVHISETDFRRFQMI PLDPKGTSQIDPNWIVRHKGKELVQTVNCDPGLAIGFDEFNAVDFSGTFFINTERDDDYA GFVFGYQSSSRFYVVMWKQVTQTYWESQPTKAQGYSGLAIKVVNSTTGPGMHLRNALWHT GNTAEQVKTLWHDPRQIGWKDFTAYRWRLTHRPKTGFIRVVMYEGKKIMADSGPLYDKTY AGGRLGLFVFSQEMTFFSDLKYECKD NT seq 3501 nt NT seq  +upstreamnt  +downstreamnt atggagctatccggtggtctctttctccttctgatgcttggagtctgcacaacaaaccgg attccagagactagtgatgacaacagtgtttttgatctctttgagttaattggcttgggc cgcaagagagcccacaaaggatcgggggtgcatccggtaaaaggactagagctttccagc cctgcctaccgcatagatgacgccacccgtatccctgctgtttctgatcacaaattccaa gacattctttattccatccaagctgagaagggcttcgtcttgttagctaatcttcgtccg ataaagaaggatgctggcaccatattggccgtggagcgcaaggacaactctggctacgtt tttaagttggtgctcaatggcaaggcgaaaactttggacctgagtgtctttcctgaggaa ggcaatcaaagtttggtgtcagtggaggaggtgaagctgcccattgcacgatggagtagc atcaccctctttgtgcaagaggatcaggctcaactctatgtgggctgtgataaaatgaca aacgttgagctggaaattcctattcaagacatcttcactcgggatctgtccaacagcgcc agactccgcattgctaaaggaggagttaatgacaacttccagggaatgctgcagaatgtg cggtttgtgtttggaactacactggaaaccatcctgaggaataaaggctgtcagagctct actggaacacttattaaattagacaatcccatgaatggctcccgcccagccattcgcacc aactacattggccagaaaaccaaagacatctgtggcttttcttgtgacgacctaaccaaa atgtttatagaactgcaaagcctgcgtgccctggttacaaaagttgaaaattctgtcaac catatggaacttatcgccccacataatataaagaaaggaatatgcctccataataatgtt gtgtatgaaaatgcagctgagtggaccactgatacatgtaccacatgtacctgccagaat tctgctgtaatgtgccataaagtatcttgtcctctcatgccttgttccaatgccacagtt cctgatggtgaatgctgtccaaggtgttggccaagcgattctgccgatgatgcttggtct ccctggtctgaatggaccacttgctctacaacctgtggcaatgggattcagcagagaggc cgctcttgtgacagaatcaaccatctttgtgaaggctcctcggtgcaaacacggatatgt aatatgcaagaatgtgataagagattcagacagaatggtgcttggagccattggtcccct tggtcttcctgctctgttacttgtggaactgggttaatcactcgaatccgtctgtgcaat tctccacttcctcagatgggaggcaaaacgtgtgaaggagaggcacgagaaaacatgcct tgccagaaaagcccatgcccaattaatgggaactgggggccatggtcgccttgggatgcc tgtccaattacgtgtggcggaggcattcagaaacgcagccgtctctgcaacaatccagag cccaaatttgaagggaaggattgcattggtgatgcaacagccactcagatgtgcaacaag caggattgcccaatcgatggatgcctgtctaatccttgttttgcgggaactaaatgcact agtttccctgatggttcctggaaatgtggtccatgccctgttggctatcaaggaaatgga attagatgcaaagatattgatgaatgccaagaggttccagatgcttgctttgtacttagt ggagtacacagatgtgagaatactgtacctggttatcactgcctgccttgtccttcccgc tttacaggaacacagccctttggtcggggtgtggaagatgcaatagcaaagaaacaggtg tgcaagccacgtaacccatgtgctgatggaactcacaactgcaacaaatatgccaagtgc atctaccttggacacttcagtgacccgatgtatcgctgtgaatgtaaaccagggtatgcc ggtaacgggattatctgtggagaagacactgacttagatggatggccaaatgagaacctt cactgtgttgccaatgctacttatcactgcactaaagataattgccccaatcttcccaat tctggacaggaagactatgatgatgatggaattggtgatgcctgtgatgatgatgatgat aatgacaagattccagatgatagggataactgtccattcaattacaatccacaacagtat gactacgatagggatgatgttggtgatcgctgtgataattgcccatacaatcacaatcct cttcagatagacaccgaccaaaatggagaaggcgatgcttgtgctgtggatatcgacgga gatggcattcttaatgaaagagacaactgccaatatgtgtacaatgtggaacagacggat ttagacttggatggtgttggagatcagtgtgacaactgtccattggcacataatccagat cagatggattcagattccgatcgcataggggataagtgtgatgacaaccaggatattgat gaagatggccaccagaataatcttgataactgtccttacgtacccaatgctaaccaagct gaccatgacaaggatgggaaaggggatgcctgtgaccacgatgatgacaatgatggtgtt cctgatgatagagataattgcagattggttcccaacccagaccaagctgattcagatggt gatgggcgtggagatgcatgcaaagatgactttgacaatgataacgtcaacgacattgat gacgtctgccctgagaatgttcatataagtgagacagacttccgtcgattccagatgatt cccctggatccaaagggaacatctcaaattgatcccaactggattgttcgtcacaaaggc aaagaactggttcagactgtcaactgtgatcctggacttgctattggttttgatgaattt aatgctgttgacttcagtggcactttcttcattaacacggaaagagatgatgactatgct ggctttgtatttgggtatcaatccagcagccgtttttatgtggtcatgtggaagcaagtt acccaaacgtattgggaatcacagccaaccaaagctcaaggatattcaggtcttgctatc aaagtagtgaactccaccacgggtcctggaatgcaccttcgtaatgccttgtggcatact ggaaatactgctgaacaggtaaagactttgtggcatgaccctcgtcagataggttggaaa gatttcactgcttacagatggcgtctcactcacaggccaaaaactggcttcattagagtg gtaatgtatgaaggaaagaagatcatggctgactctggccccctctatgacaaaacctat gctggtggtcgcttaggattgtttgtcttctctcaagaaatgacattcttctctgatcta aaatatgagtgtaaagattaa

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