Crotalus tigris (Tiger rattlesnake): 120308369
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Entry
120308369 CDS
T08476
Symbol
RFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe isoform X1
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig00514
Other types of O-glycan biosynthesis
ctig04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
120308369 (RFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120308369 (RFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ctig01003
]
120308369 (RFNG)
Enzymes [BR:
ctig01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
120308369 (RFNG)
Glycosyltransferases [BR:
ctig01003
]
Glycan extension
O-Glycan
120308369 (RFNG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
B3GALT2_N
Motif
Other DBs
NCBI-GeneID:
120308369
NCBI-ProteinID:
XP_039200284
LinkDB
All DBs
Position
Unknown
AA seq
397 aa
AA seq
DB search
MSFSCIRLTKICFLFSVITCTVLLLLIPKFQSSWRFKIYPQPRPSLVFNASNKDETPLQQ
VEFNSPNPLDAEVDNIVPLTKENILEKWNHYVTDIGGSHLKANGKINKRPHNVIHMKSAE
VSAKEKLELKDIFIAVKTTRKYHKTRLNLLLQTWISQAKGQTFVFTDGEDRELHLRAGDH
IINTNCSAVHTRQALCCKMSVEYDKFLESGQKWFCHVDDDNYVNLKSLLSLLSAFSHSQD
IYIGRPSLDHPIEAADHLRNDGSTTTKFWFATGGAGFCISRGLALKMSPWASLGSFISTA
ERIRLPDDCTIGYIIEGLLEVKLLHSPLFHSHLENLQQLRGRAVLRQVTLSYGGPENKRN
VVSVGEVFSIQQDPTRFKSVHCLLYPETLWCPTVIVK
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgagcttttcttgcattaggctcactaagatatgcttcctgttctctgtaatcacttgc
acagttcttcttttgctaattcccaaatttcaatccagctggagatttaagatctatcct
cagccacgtccatcacttgtttttaatgcttccaacaaggatgaaaccccacttcagcag
gtggagttcaattcccccaatcctttggatgctgaggttgacaatatagtgcccttaact
aaagagaatatactagaaaaatggaatcattatgtcacagacattggtggatcccatctg
aaagctaatggaaagataaataaaaggccacacaatgtgatacatatgaaatctgctgaa
gtctctgctaaggaaaagttggaattgaaagatatttttattgctgtgaaaactacaagg
aaatatcataaaacaaggctaaacttgctcttgcaaacatggatatctcaggccaaaggt
cagacgtttgtattcacagacggggaagatcgtgagctgcatcttagagcaggggatcat
ataattaataccaattgctcagctgttcatacccgccaagctctctgctgtaagatgtca
gtggaatatgataaatttctagagtctggacaaaagtggttttgtcatgtagacgatgac
aactatgtgaatttgaagagcctcctgagtcttttatctgctttctcacacagccaagat
atatatataggaagacccagtctggaccatccaattgaagcagcagaccatctccggaat
gatggatcaaccactacaaaattctggtttgccacaggtggtgctggattttgcatcagc
agaggcctggccctcaagatgagcccatgggctagccttgggagcttcatcagcactgca
gagagaattcgcctccctgatgattgcaccattggctacatcattgaggggctcttggaa
gtgaaactgttacacagccctttatttcactctcatctggaaaacctacagcagctgcgt
ggtagggctgtactcagacaagttaccttgagttatggtggccctgagaataaacgcaat
gttgtcagtgtgggtgaagtattcagtatacaacaagatccaactcggttcaaatctgtc
cactgcctcctctaccctgaaactctgtggtgccctactgtaatagtgaaatga
DBGET
integrated database retrieval system
