Crotalus tigris (Tiger rattlesnake): 120308396
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Entry
120308396 CDS
T08476
Name
(RefSeq) H-2 class II histocompatibility antigen, E-S beta chain-like isoform X1
KO
K06752
MHC class II antigen
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04145
Phagosome
ctig04514
Cell adhesion molecules
ctig04672
Intestinal immune network for IgA production
ctig05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120308396
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120308396
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
120308396
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120308396
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ctig04147
]
120308396
Exosome [BR:
ctig04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120308396
Exosomal proteins of epithelial cells
120308396
Exosomal proteins of breast milk
120308396
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Ortholog
Paralog
GFIT
Motif
Pfam:
MHC_II_beta
C1-set
Ig_3
C2-set_2
ig
Psg1
I-set
Ig_2
PcRGLX_1st
Motif
Other DBs
NCBI-GeneID:
120308396
NCBI-ProteinID:
XP_039200353
LinkDB
All DBs
Position
Unknown
AA seq
270 aa
AA seq
DB search
MGSAGLPLMLLLAGALARIPGSEGGKETPAHFLYQAKGECHFFNGTRRVRFLERHFYDRQ
EYLRFDSARGEFEAVTALGKGDAEAFNRDKQRLQDRKAAVDYFCQHNYGVYNYEVAKREE
RLIGRRAKPTVSISPTKLDPTSPNTILLCIVRGFYPVEIEVRWLKNGQPEKEGVAFGEEL
QNGDWTYQLHVMLETQPQRGDVYTCQVEHASLEAPITVQWEPRSSNSARSKLWTGIVAAV
IGVIFFAMGLSLYLKSKKAIPIQPPAALMN
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgggctccgcggggctccccctgatgctgctgctggcgggggcgctggcccggatcccc
ggaagcgaaggggggaaggagacccccgcccatttcctgtaccaggcgaagggcgagtgc
catttcttcaacgggacgcggcgggtgcggttcctggagcggcacttctacgaccggcag
gagtatctccgcttcgacagcgcccgcggggagttcgaggccgtcacggcgttggggaag
ggggatgcggaggctttcaacagggataagcagcgcctgcaggaccggaaggccgctgtg
gattacttctgccagcacaactacggggtgtacaactacgaggtggccaagagggaggag
cgtctgattggccggagagccaagcccaccgtctccatctcccccaccaagctggacccc
acttcccctaacaccatcctcctctgcatcgtgaggggcttctaccctgtggagattgag
gttcggtggctgaagaatgggcagccagagaaggagggtgtggccttcggggaggagctc
cagaatggagactggacctaccagctccacgtgatgctggagacccagccccagcggggg
gacgtctacacctgccaggtggagcatgccagtctggaggcccccatcaccgtccagtgg
gagccccgttcctccaactctgctaggagcaaactctggacagggatcgtggcagccgtg
atcggggtgatcttctttgccatggggctctccctctacctgaagagcaagaaagcaatt
cccatccagcctcctgcagcactcatgaattaa
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