Crotalus tigris (Tiger rattlesnake): 120308971
Help
Entry
120308971 CDS
T08476
Symbol
IRF5
Name
(RefSeq) interferon regulatory factor 5
KO
K09446
interferon regulatory factor 5
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
120308971 (IRF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctig03000
]
120308971 (IRF5)
Transcription factors [BR:
ctig03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
120308971 (IRF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Gag_p6
Motif
Other DBs
NCBI-GeneID:
120308971
NCBI-ProteinID:
XP_039201647
LinkDB
All DBs
Position
Unknown
AA seq
503 aa
AA seq
DB search
MNPHPRRIRLKPWLVAQVNSGQYPGLRWVDAEQKRFCIPWRHATRHVPCQDDENTIFKAW
AKETGKYNEGVDEPDPAKWKANLRCALNKSREFSLIYDGTKDTPMQPYKIYEVCDAPLPN
GESFAGEELVGCEEEEELQKMMPTLRIADPSHVAEPLPPYPWLKQENLYANPCAKGTFPH
LEVGPVPPAPAPVGAFAVGGEPPVPSFAESASRMSLVPENMSMPGGLAPLPPGECPVAPV
EQFIPNLLISPHMLPLTDLEIKFQYRGRPVGALTISNPQGCRLFHSHLEPTQEQVELFGP
VTLEQVRFPSAEAVPNEKQRYYTHQLLDVLDRGLILELQGQDIYAIRLCQCKVFWTGPCA
GQLPGPNPIEREKKVKLFSLENFLNGLILFQKGQSPTPPPYEIFFCFGEEWPDRKPKEKK
LITVQVVPVAARLLLEMFSGELSWSADSVRLQISHPDLKDKMVSQFKELHQLWQNQQGMQ
VAQLEPGGPSSWEMQTGGNSMQQ
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaacccccacccgcggcgcatccgcctgaagccctggctggtggcccaggtgaacagc
ggccagtatccgggtctgcgctgggtagacgcggagcagaagcggttttgcatcccctgg
cgccacgccactcggcacgtgccctgccaggatgacgagaacaccatctttaaggcctgg
gccaaagagacgggcaaatacaacgagggcgtggacgagccggatccggccaagtggaag
gccaacctgcgttgcgccctcaacaaaagccgggagttcagcctgatctacgacgggacc
aaggacacgcccatgcagccctacaagatttacgaggtctgcgatgcacccctgcccaac
ggagagagctttgctggagaagagctggtgggatgtgaagaagaggaagagctgcagaaa
atgatgcccaccttgagaatcgcagatccgtcgcacgtggcagaacccctgcccccctac
ccgtggctcaagcaagagaacctctacgccaacccgtgcgccaaggggaccttccctcac
ttggaggtggggcctgtacccccggcaccggcgcccgtgggggccttcgcagtaggaggg
gagcctccggtgcccagctttgccgaatctgcgagccggatgtcgctggtgccggagaac
atgtccatgccaggcggcctggcgcctctgcccccgggggagtgtccggtagcgcccgtg
gagcagttcatcccgaatttattgatcagccctcacatgctgccactgaccgacctggag
atcaaattccagtaccgcggacgtccggtgggggccctgaccatcagcaacccccagggc
tgccgcctcttccacagccacctggagcccacccaggagcaggtagaactcttcggcccg
gtgacgctggagcaggtccgcttccccagcgccgaggccgtccccaacgagaagcagcgc
tactacacccaccagctactcgacgtcctggaccggggtctgatcctggagctgcaaggc
caggacatttacgccatccgcttgtgccaatgcaaagtcttctggaccggcccgtgtgcc
ggacagctgcccgggcccaaccctatcgagcgggagaagaaggtcaagcttttcagcctg
gagaatttcctcaacggactcattctgttccagaaaggccagagcccgacaccgcctccc
tacgagatattcttctgctttggggaagaatggcccgatcggaagcccaaggagaaaaaa
ctcatcacggtccaggtggtccccgtagccgcccggctccttttggaaatgttttccgga
gagttgtcctggtcggccgacagcgtccgcctgcagatctcgcacccggacctcaaggac
aagatggtttcgcaattcaaagaactgcatcagctctggcaaaaccagcaaggcatgcag
gtcgcccagctggagccggggggacccagcagctgggaaatgcagaccgggggcaacagc
atgcagcagtga
DBGET
integrated database retrieval system